BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039398
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36037.3| unnamed protein product [Vitis vinifera]               88   6e-16
emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]    88   6e-16
ref|XP_002327364.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containi...    75   6e-12
ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containi...    75   6e-12

>emb|CBI36037.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/82 (53%), Positives = 62/82 (75%), Gaps = 7/82 (8%)
 Frame = -3

Query: 226 YLETLTITLTPSEVSEILKSLHTPYKALEFFKFCYT-IPNFRHDCFTYNRILTILSKCSG 50
           YL+TL +T+TPSE SEILK L+ P+ +LEFF+FC + IP F+H+ FTYNR+L ILSK S 
Sbjct: 108 YLQTLNLTITPSEASEILKCLNHPHLSLEFFRFCSSNIPKFQHNSFTYNRLLVILSKPSA 167

Query: 49  ------VEIVRKVLDEMEKNGV 2
                 ++++R +LD+ME+ GV
Sbjct: 168 LRDSERLDLIRAILDDMERCGV 189


>emb|CAN82028.1| hypothetical protein VITISV_000613 [Vitis vinifera]
          Length = 790

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 44/82 (53%), Positives = 62/82 (75%), Gaps = 7/82 (8%)
 Frame = -3

Query: 226 YLETLTITLTPSEVSEILKSLHTPYKALEFFKFCYT-IPNFRHDCFTYNRILTILSKCSG 50
           YL+TL +T+TPSE SEILK L+ P+ +LEFF+FC + IP F+H+ FTYNR+L ILSK S 
Sbjct: 108 YLQTLNLTITPSEASEILKCLNHPHLSLEFFRFCSSNIPKFQHNSFTYNRLLVILSKPSA 167

Query: 49  ------VEIVRKVLDEMEKNGV 2
                 ++++R +LD+ME+ GV
Sbjct: 168 LRDSERLDLIRAILDDMERCGV 189


>ref|XP_002327364.1| predicted protein [Populus trichocarpa] gi|222835734|gb|EEE74169.1|
           predicted protein [Populus trichocarpa]
          Length = 662

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/79 (55%), Positives = 58/79 (73%), Gaps = 4/79 (5%)
 Frame = -3

Query: 226 YLETLTITLTPSEVSEILKSLHTPYKALEFFKFCYTI-PNFRHDCFTYNRILTILSKCS- 53
           YL  L+I+LTP+E SEILKSL++P  AL FF FC ++ PNF HDCFTY+RI+ ILSK + 
Sbjct: 97  YLSALSISLTPNEASEILKSLNSPSLALRFFHFCPSLSPNFHHDCFTYSRIILILSKSNL 156

Query: 52  --GVEIVRKVLDEMEKNGV 2
                + R ++ EME+NGV
Sbjct: 157 PDRFHLARSIVSEMERNGV 175


>ref|XP_004163164.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Cucumis sativus]
          Length = 685

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/79 (46%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
 Frame = -3

Query: 226 YLETLTITLTPSEVSEILKSLHTPYKALEFFKFCYTI-PNFRHDCFTYNRILTILSKCSG 50
           Y ++L+++LTP+E SEILKSL++P  AL+FF  C ++ P FRHD FTY+RIL +LS  S 
Sbjct: 120 YFQSLSVSLTPAEASEILKSLNSPDLALQFFHRCSSLCPKFRHDAFTYSRILLMLSHSSS 179

Query: 49  ---VEIVRKVLDEMEKNGV 2
              ++ VR++L +M+++ +
Sbjct: 180 SKRIDQVREILSQMDRDQI 198


>ref|XP_004150337.1| PREDICTED: pentatricopeptide repeat-containing protein At1g51965,
           mitochondrial-like [Cucumis sativus]
          Length = 690

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/79 (46%), Positives = 59/79 (74%), Gaps = 4/79 (5%)
 Frame = -3

Query: 226 YLETLTITLTPSEVSEILKSLHTPYKALEFFKFCYTI-PNFRHDCFTYNRILTILSKCSG 50
           Y ++L+++LTP+E SEILKSL++P  AL+FF  C ++ P FRHD FTY+RIL +LS  S 
Sbjct: 125 YFQSLSVSLTPAEASEILKSLNSPDLALQFFHRCSSLCPKFRHDAFTYSRILLMLSHSSS 184

Query: 49  ---VEIVRKVLDEMEKNGV 2
              ++ VR++L +M+++ +
Sbjct: 185 SKRIDQVREILSQMDRDQI 203