BLASTX nr result

ID: Coptis23_contig00039395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039395
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321637.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002511307.1| conserved hypothetical protein [Ricinus comm...    64   1e-08

>ref|XP_002321637.1| predicted protein [Populus trichocarpa] gi|222868633|gb|EEF05764.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/56 (62%), Positives = 40/56 (71%)
 Frame = -2

Query: 195 RHRSVESFSDEILSKSAKHSRNKSETVFESQPQLDAAVEISPASAVHQWFSNILKP 28
           RHRS E+FS EIL+KSAKHSRNKSE++ E+        E SPAS    WFSNILKP
Sbjct: 141 RHRSKEAFSGEILTKSAKHSRNKSESLVET------PAEPSPASQFQGWFSNILKP 190


>ref|XP_002511307.1| conserved hypothetical protein [Ricinus communis]
           gi|223550422|gb|EEF51909.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 648

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/65 (56%), Positives = 45/65 (69%)
 Frame = -2

Query: 195 RHRSVESFSDEILSKSAKHSRNKSETVFESQPQLDAAVEISPASAVHQWFSNILKPHHHV 16
           RHR+VE FS EIL KSAKH RNKSE++ ++ P   +  E SPAS V +WFSNILKP +  
Sbjct: 138 RHRAVEGFSGEILIKSAKHIRNKSESL-DNLP--ISPSEPSPASQVQEWFSNILKPSNPN 194

Query: 15  PQDSN 1
              SN
Sbjct: 195 TNQSN 199


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