BLASTX nr result

ID: Coptis23_contig00039394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039394
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20471.3| unnamed protein product [Vitis vinifera]              172   3e-41
ref|XP_002319794.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_002866052.1| glycosyl hydrolase family 1 protein [Arabido...   167   6e-40
ref|XP_003527305.1| PREDICTED: beta-glucosidase 25-like [Glycine...   166   2e-39
ref|XP_002280323.2| PREDICTED: putative beta-glucosidase 41-like...   165   3e-39

>emb|CBI20471.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  172 bits (435), Expect = 3e-41
 Identities = 78/93 (83%), Positives = 85/93 (91%)
 Frame = +3

Query: 3   GNKGDSIWDTFTRRPGRIMDFSNADTTVDQYHRFKTDVDLMKDLGVDAYRFSISWSRIFP 182
           GNKG SIWDTFTR+PGRI+DFSNAD  VDQYHRFKTD+DLMKDLG+DAYRFSISWSRIFP
Sbjct: 123 GNKGVSIWDTFTRQPGRILDFSNADMAVDQYHRFKTDIDLMKDLGMDAYRFSISWSRIFP 182

Query: 183 NGTGEPNQEGLQYYNSLIDTLLTKGIKPYATLY 281
            GTGEPN EG++YYNSLID LL KGI+PY TLY
Sbjct: 183 KGTGEPNLEGIEYYNSLIDALLEKGIQPYVTLY 215


>ref|XP_002319794.1| predicted protein [Populus trichocarpa] gi|222858170|gb|EEE95717.1|
           predicted protein [Populus trichocarpa]
          Length = 515

 Score =  170 bits (431), Expect = 1e-40
 Identities = 77/93 (82%), Positives = 84/93 (90%)
 Frame = +3

Query: 3   GNKGDSIWDTFTRRPGRIMDFSNADTTVDQYHRFKTDVDLMKDLGVDAYRFSISWSRIFP 182
           GNKGDSIWDTFTR+PGRI+D SNADT VDQYHRFK D+DLMKDLG+DAYRFSISW RIFP
Sbjct: 59  GNKGDSIWDTFTRQPGRILDLSNADTAVDQYHRFKGDIDLMKDLGMDAYRFSISWPRIFP 118

Query: 183 NGTGEPNQEGLQYYNSLIDTLLTKGIKPYATLY 281
           NGTG PNQEG+ YY+ LIDTLL KGI+PY TLY
Sbjct: 119 NGTGVPNQEGIDYYSCLIDTLLEKGIQPYVTLY 151


>ref|XP_002866052.1| glycosyl hydrolase family 1 protein [Arabidopsis lyrata subsp.
           lyrata] gi|297311887|gb|EFH42311.1| glycosyl hydrolase
           family 1 protein [Arabidopsis lyrata subsp. lyrata]
          Length = 529

 Score =  167 bits (424), Expect = 6e-40
 Identities = 75/93 (80%), Positives = 85/93 (91%)
 Frame = +3

Query: 3   GNKGDSIWDTFTRRPGRIMDFSNADTTVDQYHRFKTDVDLMKDLGVDAYRFSISWSRIFP 182
           GNKG SIWDTFT++PG+I+DFSNADTTVDQYHRF +D+DLMKDL +DAYRFSISWSRIFP
Sbjct: 57  GNKGQSIWDTFTKKPGKILDFSNADTTVDQYHRFHSDIDLMKDLRMDAYRFSISWSRIFP 116

Query: 183 NGTGEPNQEGLQYYNSLIDTLLTKGIKPYATLY 281
           NGTGE N +G++YYNSLID LL KGIKPY TLY
Sbjct: 117 NGTGEVNPDGVKYYNSLIDALLAKGIKPYVTLY 149


>ref|XP_003527305.1| PREDICTED: beta-glucosidase 25-like [Glycine max]
          Length = 507

 Score =  166 bits (419), Expect = 2e-39
 Identities = 73/93 (78%), Positives = 86/93 (92%)
 Frame = +3

Query: 3   GNKGDSIWDTFTRRPGRIMDFSNADTTVDQYHRFKTDVDLMKDLGVDAYRFSISWSRIFP 182
           GNKGDSIWDTF+R PGRI+DFSNAD  VDQYHRF+ D++LMKDLG+D+YRFSISW RIFP
Sbjct: 51  GNKGDSIWDTFSRIPGRIVDFSNADKAVDQYHRFQNDINLMKDLGMDSYRFSISWPRIFP 110

Query: 183 NGTGEPNQEGLQYYNSLIDTLLTKGIKPYATLY 281
           NGTGEPN+EG++YYNSLID+LL KGI+P+ TLY
Sbjct: 111 NGTGEPNKEGIKYYNSLIDSLLVKGIQPFVTLY 143


>ref|XP_002280323.2| PREDICTED: putative beta-glucosidase 41-like [Vitis vinifera]
          Length = 510

 Score =  165 bits (418), Expect = 3e-39
 Identities = 78/99 (78%), Positives = 85/99 (85%), Gaps = 6/99 (6%)
 Frame = +3

Query: 3   GNKGDSIWDTFTRRPGRIMDFSNADTTVDQYHRFKTDVDLMKDLGVDAYRFSISWSRIFP 182
           GNKG SIWDTFTR+PGRI+DFSNAD  VDQYHRFKTD+DLMKDLG+DAYRFSISWSRIFP
Sbjct: 47  GNKGVSIWDTFTRQPGRILDFSNADMAVDQYHRFKTDIDLMKDLGMDAYRFSISWSRIFP 106

Query: 183 ------NGTGEPNQEGLQYYNSLIDTLLTKGIKPYATLY 281
                  GTGEPN EG++YYNSLID LL KGI+PY TLY
Sbjct: 107 RIFLLTEGTGEPNLEGIEYYNSLIDALLEKGIQPYVTLY 145


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