BLASTX nr result

ID: Coptis23_contig00039386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039386
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81282.1| hypothetical protein VITISV_037391 [Vitis vinifera]    58   7e-07
emb|CAN75222.1| hypothetical protein VITISV_024666 [Vitis vinifera]    58   7e-07
emb|CAN82775.1| hypothetical protein VITISV_000481 [Vitis vinifera]    57   1e-06
emb|CAN65298.1| hypothetical protein VITISV_008130 [Vitis vinifera]    57   1e-06
emb|CAN77578.1| hypothetical protein VITISV_015344 [Vitis vinifera]    57   2e-06

>emb|CAN81282.1| hypothetical protein VITISV_037391 [Vitis vinifera]
          Length = 1449

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/62 (40%), Positives = 37/62 (59%)
 Frame = -2

Query: 208 AMKCLKSDKSLGSDAFPFEFTRKVWELVRNNFMDMIRDFYDSSFLTHSLNNTLIKLIPKK 29
           A+  +  DK+LG D F   F +  W+ V+   +++ ++FYD SF   SLN T + LIPKK
Sbjct: 808 ALMEMNDDKALGLDRFTVAFWQTCWDFVKEEILELFKEFYDQSFFVKSLNTTFLVLIPKK 867

Query: 28  QG 23
            G
Sbjct: 868 GG 869


>emb|CAN75222.1| hypothetical protein VITISV_024666 [Vitis vinifera]
          Length = 535

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/62 (40%), Positives = 38/62 (61%)
 Frame = -2

Query: 208 AMKCLKSDKSLGSDAFPFEFTRKVWELVRNNFMDMIRDFYDSSFLTHSLNNTLIKLIPKK 29
           A+  +  DK+LGS+ F   F +  WE V+   +DM ++FY+ +    SLNNT + L+PKK
Sbjct: 26  ALMEMNGDKALGSNGFTVAFWQSCWEFVKEEVLDMFKEFYEQNSFIKSLNNTFLVLLPKK 85

Query: 28  QG 23
            G
Sbjct: 86  GG 87


>emb|CAN82775.1| hypothetical protein VITISV_000481 [Vitis vinifera]
          Length = 594

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/62 (43%), Positives = 36/62 (58%)
 Frame = -2

Query: 208 AMKCLKSDKSLGSDAFPFEFTRKVWELVRNNFMDMIRDFYDSSFLTHSLNNTLIKLIPKK 29
           A+  +  DK+LG D F   F +  WE V+   MD+ R+FYD      SLN+T + LIPKK
Sbjct: 11  ALMDMNGDKALGLDGFIVAFWQSSWEPVKEEIMDLFREFYDQCSFAKSLNSTFLVLIPKK 70

Query: 28  QG 23
            G
Sbjct: 71  GG 72


>emb|CAN65298.1| hypothetical protein VITISV_008130 [Vitis vinifera]
          Length = 1936

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/62 (40%), Positives = 38/62 (61%)
 Frame = -2

Query: 208  AMKCLKSDKSLGSDAFPFEFTRKVWELVRNNFMDMIRDFYDSSFLTHSLNNTLIKLIPKK 29
            A+  +  DK+ G D F   F +  WE+V+ + +DM ++FYD +    SLN+T + LIPKK
Sbjct: 1154 ALMGMNGDKAPGPDGFTVAFWQNCWEIVKEDVLDMFKEFYDQNSFIKSLNHTFLVLIPKK 1213

Query: 28   QG 23
             G
Sbjct: 1214 GG 1215


>emb|CAN77578.1| hypothetical protein VITISV_015344 [Vitis vinifera]
          Length = 1102

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/62 (38%), Positives = 36/62 (58%)
 Frame = -2

Query: 208 AMKCLKSDKSLGSDAFPFEFTRKVWELVRNNFMDMIRDFYDSSFLTHSLNNTLIKLIPKK 29
           A+  +  DK+ G D F   F +  WE ++   ++M ++FY+ S    SLNNT + LIPKK
Sbjct: 706 ALMEMNEDKAPGPDGFTLPFWQSCWEFIKEEILEMFKEFYEHSSFLKSLNNTFLVLIPKK 765

Query: 28  QG 23
            G
Sbjct: 766 SG 767


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