BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039372
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15366.3| unnamed protein product [Vitis vinifera]              246   2e-63
ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containi...   246   2e-63
ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containi...   232   2e-59
ref|XP_002322051.1| predicted protein [Populus trichocarpa] gi|2...   231   5e-59
ref|XP_002512026.1| pentatricopeptide repeat-containing protein,...   229   2e-58

>emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  246 bits (628), Expect = 2e-63
 Identities = 113/176 (64%), Positives = 146/176 (82%)
 Frame = -1

Query: 529  LFERMQSEGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPKLEHYACMVDML 350
            LFE+M   GLKPD FTF  +LMACSH+GLV +GL+YF++M   + IEPKLEHY C+VDML
Sbjct: 499  LFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDML 558

Query: 349  GRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVSEILLDLEPYKAENYV 170
            GRAG ++ AL L+EEMP  PD+ IW +LLSSC+ HG++ LG+KV+  LL+LEP K ENYV
Sbjct: 559  GRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYV 618

Query: 169  LVSNLFAKAGRWEDVRRVRGRMKEMGLKKDIGCSWIEVEGKIYNFVVGDKTLPDSE 2
            L+SNLFA +G+W+DVRRVRGRMK++GL+KD GCSWIEV GK++NF++GD+ LP+ E
Sbjct: 619  LISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELE 674


>ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
            [Vitis vinifera]
          Length = 881

 Score =  246 bits (628), Expect = 2e-63
 Identities = 113/176 (64%), Positives = 146/176 (82%)
 Frame = -1

Query: 529  LFERMQSEGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPKLEHYACMVDML 350
            LFE+M   GLKPD FTF  +LMACSH+GLV +GL+YF++M   + IEPKLEHY C+VDML
Sbjct: 597  LFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDML 656

Query: 349  GRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVSEILLDLEPYKAENYV 170
            GRAG ++ AL L+EEMP  PD+ IW +LLSSC+ HG++ LG+KV+  LL+LEP K ENYV
Sbjct: 657  GRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYV 716

Query: 169  LVSNLFAKAGRWEDVRRVRGRMKEMGLKKDIGCSWIEVEGKIYNFVVGDKTLPDSE 2
            L+SNLFA +G+W+DVRRVRGRMK++GL+KD GCSWIEV GK++NF++GD+ LP+ E
Sbjct: 717  LISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELE 772


>ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
            [Glycine max]
          Length = 975

 Score =  232 bits (592), Expect = 2e-59
 Identities = 105/176 (59%), Positives = 144/176 (81%)
 Frame = -1

Query: 529  LFERMQSEGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPKLEHYACMVDML 350
            LFE MQ++G +PD+FTF+ +L+AC+H+GLV EGLKY  +M+    ++PKLEHYAC+VDML
Sbjct: 691  LFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDML 750

Query: 349  GRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVSEILLDLEPYKAENYV 170
            GRAG L  AL L+ EMP++PD+GIW +LLSSC+ +GD+ +G++VS+ LL+LEP KAENYV
Sbjct: 751  GRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNKAENYV 810

Query: 169  LVSNLFAKAGRWEDVRRVRGRMKEMGLKKDIGCSWIEVEGKIYNFVVGDKTLPDSE 2
            L+SNL+A  G+W++VR+VR RMKE GL KD GCSWIE+ G +Y F+V D +L +S+
Sbjct: 811  LLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFLVSDGSLSESK 866


>ref|XP_002322051.1| predicted protein [Populus trichocarpa] gi|222869047|gb|EEF06178.1|
            predicted protein [Populus trichocarpa]
          Length = 924

 Score =  231 bits (589), Expect = 5e-59
 Identities = 109/175 (62%), Positives = 137/175 (78%)
 Frame = -1

Query: 529  LFERMQSEGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPKLEHYACMVDML 350
            L+ERM+  G  PD FT+I +LMAC H+GLV EGLKYF EM+  N IEPKLEHYAC++DML
Sbjct: 640  LYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDML 699

Query: 349  GRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVSEILLDLEPYKAENYV 170
             RAG L+ AL L+ EMPE+ D  IW +LL SC+T G + +G+KV++ LL+LEP KAENYV
Sbjct: 700  ARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDKAENYV 759

Query: 169  LVSNLFAKAGRWEDVRRVRGRMKEMGLKKDIGCSWIEVEGKIYNFVVGDKTLPDS 5
            L+SNL+A  G+W+ VRRVR  MKE+GL+KD GCSWIEV G++Y+FVVGD   P S
Sbjct: 760  LLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGDSLQPKS 814


>ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223549206|gb|EEF50695.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 810

 Score =  229 bits (584), Expect = 2e-58
 Identities = 106/176 (60%), Positives = 139/176 (78%)
 Frame = -1

Query: 529  LFERMQSEGLKPDAFTFISLLMACSHSGLVGEGLKYFSEMRTKNYIEPKLEHYACMVDML 350
            LFERM+  G  PD FTFI +L  CSH+GLV EGLKYF+EM+  + IEPKLEHYAC++DML
Sbjct: 526  LFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDML 585

Query: 349  GRAGHLNHALNLLEEMPEKPDAGIWGALLSSCKTHGDVVLGQKVSEILLDLEPYKAENYV 170
            GRAG L+ AL L+ EMPE+PD+ +W +LLS C+  G++ +GQ V+E LL+LEP   ENYV
Sbjct: 586  GRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLELEPKNVENYV 645

Query: 169  LVSNLFAKAGRWEDVRRVRGRMKEMGLKKDIGCSWIEVEGKIYNFVVGDKTLPDSE 2
             +SNL+A +GRW+DVRRVR  +K++GL+KD GCSWIE+ GK+++FV GD  LP S+
Sbjct: 646  SLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGGKVHSFVAGDNLLPQSK 701