BLASTX nr result

ID: Coptis23_contig00039371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039371
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    77   1e-12
ref|XP_002319313.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
 Frame = +3

Query: 60  LSDLSFNGFFFTWNNKVKGKGRIQSKIDCYLTNSLWIDVYPLSKAAALPHGVSDHSPILL 239
           L DL F G  FTW N   G   I+ ++D  L NS W+D++P +K   LP   SDH P+L+
Sbjct: 172 LLDLGFQGPKFTWTNGRTGGSLIKERLDRALVNSEWLDLFPDTKVIHLPRTFSDHCPLLI 231

Query: 240 FWHDYER-KALPFRFKDYWVEQEEFQGMLEEVW 335
            +++  R ++ PFR K+ W    +F  ++EE W
Sbjct: 232 LFNENPRSESFPFRCKEVWAYHPDFTNVIEETW 264


>ref|XP_002319313.1| predicted protein [Populus trichocarpa] gi|222857689|gb|EEE95236.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
 Frame = +3

Query: 24  VEGFVECLQRS*LSDLSFNGFFFTWNNKVKGKGRIQSKIDCYLTNSLWIDVYPLSKAAAL 203
           ++ F  C+Q + + DL ++G  +TW N+   K  I  K+D  L N  W   +PL +A  L
Sbjct: 1   MDRFKTCIQEAKVDDLRYSGMHYTWTNQCP-KNLIMWKLDSVLVNENWSLNFPLLEARFL 59

Query: 204 PHGVSDHSPILL-FWHDYERKALPFRFKDYWVEQEEFQGMLEEVW 335
           P GVSDHSP+++    D +    PFRF D W++ +EF  ++++VW
Sbjct: 60  PSGVSDHSPMVVKVVGDDQNIKKPFRFFDMWMDHDEFVPLVKKVW 104


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/100 (37%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
 Frame = +3

Query: 42  CLQRS*LSDLSFNGFFFTWNNKVKGKGRIQSKIDCYLTNSLWIDVYPLSKAAALPHGVSD 221
           C++ + + DL ++G  +TW+N+   +  I  K+D  L N  W   +PLS+A  LP G+SD
Sbjct: 545 CIREAKVDDLRYSGMHYTWSNQCP-ENLIMRKLDRVLVNEKWNLKFPLSEARFLPSGMSD 603

Query: 222 HSPIL--LFWHDYERKALPFRFKDYWVEQEEFQGMLEEVW 335
           HSP++  +  +D  +K  PFRF D W++ +EF  ++++VW
Sbjct: 604 HSPMVVKVIGNDQNKKK-PFRFFDMWMDHDEFMPLVKKVW 642


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/100 (37%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
 Frame = +3

Query: 42  CLQRS*LSDLSFNGFFFTWNNKVKGKGRIQSKIDCYLTNSLWIDVYPLSKAAALPHGVSD 221
           C++ + + DL ++G  +TW+N+   +  I  K+D  L N  W   +PLS+A  LP G+SD
Sbjct: 692 CIREAKVDDLRYSGMHYTWSNQCP-ENLIMRKLDRVLVNEKWNLKFPLSEARFLPSGMSD 750

Query: 222 HSPIL--LFWHDYERKALPFRFKDYWVEQEEFQGMLEEVW 335
           HSP++  +  +D   K  PFRF D W++ +EF  ++++VW
Sbjct: 751 HSPMVVKVIGNDQNIKK-PFRFFDMWMDHDEFMPLVKKVW 789


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 2/100 (2%)
 Frame = +3

Query: 42  CLQRS*LSDLSFNGFFFTWNNKVKGKGRIQSKIDCYLTNSLWIDVYPLSKAAALPHGVSD 221
           C++ + + DL ++G  +TW+N+   +  I   +D  L N  W   +PLSKA  LP G+SD
Sbjct: 622 CIREAKVDDLRYSGMHYTWSNQCP-ENLIMRTLDRVLVNEKWNLNFPLSKARFLPSGMSD 680

Query: 222 HSPIL--LFWHDYERKALPFRFKDYWVEQEEFQGMLEEVW 335
           HSP++  +  +D   K  PFRF D W++ +EF  ++++VW
Sbjct: 681 HSPMVVKVIGNDQNIKK-PFRFFDMWMDHDEFMPLVKKVW 719


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