BLASTX nr result
ID: Coptis23_contig00039340
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00039340 (332 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|2... 63 3e-08 ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2... 62 6e-08 ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2... 61 8e-08 ref|XP_002335943.1| predicted protein [Populus trichocarpa] gi|2... 61 1e-07 ref|XP_002319313.1| predicted protein [Populus trichocarpa] gi|2... 60 1e-07 >ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|222874137|gb|EEF11268.1| predicted protein [Populus trichocarpa] Length = 557 Score = 62.8 bits (151), Expect = 3e-08 Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 3/111 (2%) Frame = +1 Query: 7 NERIGCSAVHHRETIGFHDCLNLSGLSNMKYSGNFFTWSNNADGSSRNMSKINRCLVNFA 186 ++R+G S C+ + + +++YSG +TWSN + M K++R LVN Sbjct: 430 SDRLGGSTTWADTMDRLDTCIREAQVDDLRYSGMHYTWSNQCP-ENLIMRKLDRVLVNEK 488 Query: 187 WAF-VMLIETVFSPPGVSDHS--LIKII*YASQKIHLPFRFCNIWFFHPEF 330 W L ET F P G+SDHS ++K+I Q I PFRF ++W H EF Sbjct: 489 WNLNFPLSETRFLPSGMSDHSPMVVKVI-GNDQNIKKPFRFFDMWMDHDEF 538 >ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1| predicted protein [Populus trichocarpa] Length = 1166 Score = 61.6 bits (148), Expect = 6e-08 Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 3/111 (2%) Frame = +1 Query: 7 NERIGCSAVHHRETIGFHDCLNLSGLSNMKYSGNFFTWSNNADGSSRNMSKINRCLVNFA 186 ++R+G S C+ + + +++YSG +TWSN + M K++R LVN Sbjct: 673 SDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCP-ENLIMQKLDRVLVNEK 731 Query: 187 WAFVM-LIETVFSPPGVSDHS--LIKII*YASQKIHLPFRFCNIWFFHPEF 330 W L E F P G+SDHS ++K+I Q I PFRF ++W H EF Sbjct: 732 WNLKFPLSEARFLPSGMSDHSPMVVKVI-GNDQNIKKPFRFFDMWMDHDEF 781 >ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1| predicted protein [Populus trichocarpa] Length = 809 Score = 61.2 bits (147), Expect = 8e-08 Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 3/111 (2%) Frame = +1 Query: 7 NERIGCSAVHHRETIGFHDCLNLSGLSNMKYSGNFFTWSNNADGSSRNMSKINRCLVNFA 186 ++R+G S C+ + + +++YSG +TWSN + M K++R LVN Sbjct: 673 SDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCP-ENLIMRKLDRVLVNEK 731 Query: 187 WAFVM-LIETVFSPPGVSDHS--LIKII*YASQKIHLPFRFCNIWFFHPEF 330 W L E F P G+SDHS ++K+I Q I PFRF ++W H EF Sbjct: 732 WNLKFPLSEARFLPSGMSDHSPMVVKVI-GNDQNIKKPFRFFDMWMDHDEF 781 >ref|XP_002335943.1| predicted protein [Populus trichocarpa] gi|222836494|gb|EEE74901.1| predicted protein [Populus trichocarpa] Length = 321 Score = 60.8 bits (146), Expect = 1e-07 Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 3/111 (2%) Frame = +1 Query: 7 NERIGCSAVHHRETIGFHDCLNLSGLSNMKYSGNFFTWSNNADGSSRNMSKINRCLVNFA 186 ++R+G S C+ + + +++YSG +TWSN + M K++R LVN Sbjct: 207 SDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCP-ENLIMRKLDRVLVNEK 265 Query: 187 WAF-VMLIETVFSPPGVSDHS--LIKII*YASQKIHLPFRFCNIWFFHPEF 330 W L E F P G+SDHS ++K+I Q I PFRF ++W H EF Sbjct: 266 WNLNFPLSEARFLPSGMSDHSPMVVKVI-GNDQNIKKPFRFFDMWIDHDEF 315 >ref|XP_002319313.1| predicted protein [Populus trichocarpa] gi|222857689|gb|EEE95236.1| predicted protein [Populus trichocarpa] Length = 105 Score = 60.5 bits (145), Expect = 1e-07 Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 3/95 (3%) Frame = +1 Query: 55 FHDCLNLSGLSNMKYSGNFFTWSNNADGSSRNMSKINRCLVNFAWAF-VMLIETVFSPPG 231 F C+ + + +++YSG +TW+N + M K++ LVN W+ L+E F P G Sbjct: 4 FKTCIQEAKVDDLRYSGMHYTWTNQCP-KNLIMWKLDSVLVNENWSLNFPLLEARFLPSG 62 Query: 232 VSDHS--LIKII*YASQKIHLPFRFCNIWFFHPEF 330 VSDHS ++K++ Q I PFRF ++W H EF Sbjct: 63 VSDHSPMVVKVV-GDDQNIKKPFRFFDMWMDHDEF 96