BLASTX nr result

ID: Coptis23_contig00039340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039340
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002335943.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002319313.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07

>ref|XP_002331734.1| predicted protein [Populus trichocarpa] gi|222874137|gb|EEF11268.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
 Frame = +1

Query: 7   NERIGCSAVHHRETIGFHDCLNLSGLSNMKYSGNFFTWSNNADGSSRNMSKINRCLVNFA 186
           ++R+G S            C+  + + +++YSG  +TWSN     +  M K++R LVN  
Sbjct: 430 SDRLGGSTTWADTMDRLDTCIREAQVDDLRYSGMHYTWSNQCP-ENLIMRKLDRVLVNEK 488

Query: 187 WAF-VMLIETVFSPPGVSDHS--LIKII*YASQKIHLPFRFCNIWFFHPEF 330
           W     L ET F P G+SDHS  ++K+I    Q I  PFRF ++W  H EF
Sbjct: 489 WNLNFPLSETRFLPSGMSDHSPMVVKVI-GNDQNIKKPFRFFDMWMDHDEF 538


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
 Frame = +1

Query: 7   NERIGCSAVHHRETIGFHDCLNLSGLSNMKYSGNFFTWSNNADGSSRNMSKINRCLVNFA 186
           ++R+G S            C+  + + +++YSG  +TWSN     +  M K++R LVN  
Sbjct: 673 SDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCP-ENLIMQKLDRVLVNEK 731

Query: 187 WAFVM-LIETVFSPPGVSDHS--LIKII*YASQKIHLPFRFCNIWFFHPEF 330
           W     L E  F P G+SDHS  ++K+I    Q I  PFRF ++W  H EF
Sbjct: 732 WNLKFPLSEARFLPSGMSDHSPMVVKVI-GNDQNIKKPFRFFDMWMDHDEF 781


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
 Frame = +1

Query: 7   NERIGCSAVHHRETIGFHDCLNLSGLSNMKYSGNFFTWSNNADGSSRNMSKINRCLVNFA 186
           ++R+G S            C+  + + +++YSG  +TWSN     +  M K++R LVN  
Sbjct: 673 SDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCP-ENLIMRKLDRVLVNEK 731

Query: 187 WAFVM-LIETVFSPPGVSDHS--LIKII*YASQKIHLPFRFCNIWFFHPEF 330
           W     L E  F P G+SDHS  ++K+I    Q I  PFRF ++W  H EF
Sbjct: 732 WNLKFPLSEARFLPSGMSDHSPMVVKVI-GNDQNIKKPFRFFDMWMDHDEF 781


>ref|XP_002335943.1| predicted protein [Populus trichocarpa] gi|222836494|gb|EEE74901.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
 Frame = +1

Query: 7   NERIGCSAVHHRETIGFHDCLNLSGLSNMKYSGNFFTWSNNADGSSRNMSKINRCLVNFA 186
           ++R+G S            C+  + + +++YSG  +TWSN     +  M K++R LVN  
Sbjct: 207 SDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSNQCP-ENLIMRKLDRVLVNEK 265

Query: 187 WAF-VMLIETVFSPPGVSDHS--LIKII*YASQKIHLPFRFCNIWFFHPEF 330
           W     L E  F P G+SDHS  ++K+I    Q I  PFRF ++W  H EF
Sbjct: 266 WNLNFPLSEARFLPSGMSDHSPMVVKVI-GNDQNIKKPFRFFDMWIDHDEF 315


>ref|XP_002319313.1| predicted protein [Populus trichocarpa] gi|222857689|gb|EEE95236.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
 Frame = +1

Query: 55  FHDCLNLSGLSNMKYSGNFFTWSNNADGSSRNMSKINRCLVNFAWAF-VMLIETVFSPPG 231
           F  C+  + + +++YSG  +TW+N     +  M K++  LVN  W+    L+E  F P G
Sbjct: 4   FKTCIQEAKVDDLRYSGMHYTWTNQCP-KNLIMWKLDSVLVNENWSLNFPLLEARFLPSG 62

Query: 232 VSDHS--LIKII*YASQKIHLPFRFCNIWFFHPEF 330
           VSDHS  ++K++    Q I  PFRF ++W  H EF
Sbjct: 63  VSDHSPMVVKVV-GDDQNIKKPFRFFDMWMDHDEF 96


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