BLASTX nr result

ID: Coptis23_contig00039323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039323
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553507.1| PREDICTED: probable LRR receptor-like serine...   103   2e-20
ref|XP_003520610.1| PREDICTED: probable LRR receptor-like serine...   103   2e-20
ref|XP_003632391.1| PREDICTED: probable LRR receptor-like serine...   102   4e-20
ref|XP_003553506.1| PREDICTED: probable LRR receptor-like serine...   102   4e-20
ref|XP_003521304.1| PREDICTED: probable LRR receptor-like serine...   100   2e-19

>ref|XP_003553507.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g08850-like [Glycine max]
          Length = 1230

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   LIKWRTSLPVPTPSLHP-WSITNVTNLCNWTGVTCNNAGSTVTMLDLSDMNLNGTLDQFN 179
           L+KW+ SL +  PSL+  WS+TN+ NLCNW  + C+N  +TV  ++LSD N+ GTL   +
Sbjct: 36  LVKWKNSLSLLPPSLNSSWSLTNLGNLCNWDAIACDNTNNTVLEINLSDANITGTLTPLD 95

Query: 180 FSSLPNITYFNLNGNNLNGTIPPLISNLSK 269
           F+SLPN+T  NLN NN  G+IP  I NLSK
Sbjct: 96  FASLPNLTKLNLNHNNFEGSIPSAIGNLSK 125


>ref|XP_003520610.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g08850-like [Glycine max]
          Length = 1228

 Score =  103 bits (256), Expect = 2e-20
 Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
 Frame = +3

Query: 3   LIKWRTSLPVPTP-SLHP-WSITNVTNLCNWTGVTCNNAGSTVTMLDLSDMNLNGTLDQF 176
           L+KW+ SL  P P SL+  WS++N+  LCNW  + C+N  +TV+ ++LSD NL GTL  F
Sbjct: 36  LVKWKNSLSPPLPPSLNSSWSLSNLGTLCNWDAIVCDNTNTTVSQINLSDANLTGTLTTF 95

Query: 177 NFSSLPNITYFNLNGNNLNGTIPPLISNLSK 269
           +F+SLPN+T  NLNGNN  G+IP  I  LSK
Sbjct: 96  DFASLPNLTQLNLNGNNFEGSIPSAIGKLSK 126


>ref|XP_003632391.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g08850-like [Vitis vinifera]
          Length = 1219

 Score =  102 bits (253), Expect = 4e-20
 Identities = 50/90 (55%), Positives = 65/90 (72%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   LIKWRTSLPVPTPSLHPWSITNVTNLCNWTGVTCNNAGSTVTMLDLSDMNLNGTLDQFNF 182
           LIKW+ SL   +P    WS+TN+ NLCNWTG+ C+  GS VT+++LS+  L GTL QF+F
Sbjct: 35  LIKWKNSLISSSPLNSSWSLTNIGNLCNWTGIACDTTGS-VTVINLSETELEGTLAQFDF 93

Query: 183 SSLPNITYFNLNGNN-LNGTIPPLISNLSK 269
            S PN+T FNL+ N+ LNG+IP  I NLSK
Sbjct: 94  GSFPNLTGFNLSSNSKLNGSIPSTIYNLSK 123


>ref|XP_003553506.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g08850-like [Glycine max]
          Length = 1234

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/91 (53%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
 Frame = +3

Query: 3   LIKWRTSLPVPTP-SLHP-WSITNVTNLCNWTGVTCNNAGSTVTMLDLSDMNLNGTLDQF 176
           LIKW+ SL  P P SL+  WS+TN+ NLCNW  + C+N  +TV+ ++LSD NL GTL   
Sbjct: 35  LIKWKNSLSPPLPPSLNSSWSLTNLGNLCNWDAIVCDNTNTTVSQINLSDANLTGTLTAL 94

Query: 177 NFSSLPNITYFNLNGNNLNGTIPPLISNLSK 269
           +FSSLPN+T  NLN N+  G+IP  I  LSK
Sbjct: 95  DFSSLPNLTQLNLNANHFGGSIPSAIDKLSK 125


>ref|XP_003521304.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At4g08850-like [Glycine max]
          Length = 1229

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/91 (50%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
 Frame = +3

Query: 3   LIKWRTSLPVPTPSL--HPWSITNVTNLCNWTGVTCNNAGSTVTMLDLSDMNLNGTLDQF 176
           L+KW+ SL  P PS     WS+TN+ NLCNW  + C+N  +TV  ++LSD NL GTL   
Sbjct: 36  LVKWKNSLSPPLPSSLNSSWSLTNLGNLCNWDAIVCDNTNTTVLEINLSDANLTGTLTAL 95

Query: 177 NFSSLPNITYFNLNGNNLNGTIPPLISNLSK 269
           +F+SLPN+T  NL  N+  G+IP  I NLSK
Sbjct: 96  DFASLPNLTQLNLTANHFGGSIPSAIGNLSK 126


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