BLASTX nr result

ID: Coptis23_contig00039285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039285
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD30039.1| ribosomal protein S16 [Cornus florida]                 133   1e-29
ref|YP_004563849.1| ribosomal protein S16 [Nelumbo lutea] gi|334...   131   5e-29
gb|ADD30030.1| ribosomal protein S16 [Ilex cornuta]                   130   1e-28
ref|YP_740547.1| ribosomal protein S16 [Platanus occidentalis] g...   130   1e-28
gb|ADD30048.1| ribosomal protein S16 [Trochodendron aralioides]       129   2e-28

>gb|ADD30039.1| ribosomal protein S16 [Cornus florida]
          Length = 83

 Score =  133 bits (335), Expect = 1e-29
 Identities = 66/69 (95%), Positives = 67/69 (97%)
 Frame = +3

Query: 84  Q*AIYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVHDILK 263
           Q A+YRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVHDILK
Sbjct: 13  QRAVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVHDILK 72

Query: 264 KAEVFHELR 290
           KAEVF ELR
Sbjct: 73  KAEVFKELR 81


>ref|YP_004563849.1| ribosomal protein S16 [Nelumbo lutea]
           gi|334362031|ref|YP_004564085.1| ribosomal protein S16
           [Nelumbo nucifera] gi|224474116|gb|ACN49305.1| ribosomal
           protein S16 [Nelumbo lutea] gi|224474204|gb|ACN49390.1|
           ribosomal protein S16 [Nelumbo nucifera]
           gi|290487298|gb|ADD30033.1| ribosomal protein S16
           [Nelumbo nucifera] gi|383286779|gb|AFH01429.1| ribosomal
           protein S16 (chloroplast) [Nelumbo nucifera]
           gi|383286875|gb|AFH01524.1| ribosomal protein S16
           (chloroplast) [Nelumbo lutea]
          Length = 86

 Score =  131 bits (330), Expect = 5e-29
 Identities = 66/69 (95%), Positives = 66/69 (95%)
 Frame = +3

Query: 84  Q*AIYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVHDILK 263
           Q AIYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVHDI K
Sbjct: 13  QRAIYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVHDISK 72

Query: 264 KAEVFHELR 290
           KAEVF ELR
Sbjct: 73  KAEVFKELR 81


>gb|ADD30030.1| ribosomal protein S16 [Ilex cornuta]
          Length = 88

 Score =  130 bits (327), Expect = 1e-28
 Identities = 65/69 (94%), Positives = 66/69 (95%)
 Frame = +3

Query: 84  Q*AIYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVHDILK 263
           Q A+YRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTV DILK
Sbjct: 13  QRAVYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVQDILK 72

Query: 264 KAEVFHELR 290
           KAEVF ELR
Sbjct: 73  KAEVFKELR 81


>ref|YP_740547.1| ribosomal protein S16 [Platanus occidentalis]
           gi|114054366|gb|ABI49760.1| ribosomal protein S16
           [Platanus occidentalis]
          Length = 88

 Score =  130 bits (326), Expect = 1e-28
 Identities = 65/69 (94%), Positives = 65/69 (94%)
 Frame = +3

Query: 84  Q*AIYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVHDILK 263
           Q AIYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVP ILYFLEKGAQPTGTVHDI K
Sbjct: 13  QRAIYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPVILYFLEKGAQPTGTVHDISK 72

Query: 264 KAEVFHELR 290
           KAEVF ELR
Sbjct: 73  KAEVFKELR 81


>gb|ADD30048.1| ribosomal protein S16 [Trochodendron aralioides]
          Length = 88

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/69 (94%), Positives = 65/69 (94%)
 Frame = +3

Query: 84  Q*AIYRIVAIDVRSRREGRDLRKVGFYDPIKNQTYLNVPAILYFLEKGAQPTGTVHDILK 263
           Q AIYRIVAIDVRSRREGRDLRKVGFYDPI NQTYLNVPAILYFLEKGAQPTGTVHDI K
Sbjct: 13  QRAIYRIVAIDVRSRREGRDLRKVGFYDPINNQTYLNVPAILYFLEKGAQPTGTVHDISK 72

Query: 264 KAEVFHELR 290
           KAEVF ELR
Sbjct: 73  KAEVFKELR 81


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