BLASTX nr result

ID: Coptis23_contig00039279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039279
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140247.1| PREDICTED: probable LRR receptor-like serine...   148   5e-34
emb|CBI22045.3| unnamed protein product [Vitis vinifera]              142   3e-32
ref|XP_003519558.1| PREDICTED: probable LRR receptor-like serine...   141   5e-32
ref|XP_003617471.1| BED finger-nbs resistance protein [Medicago ...   137   1e-30
ref|NP_172244.2| putative LRR receptor-like serine/threonine-pro...   135   3e-30

>ref|XP_004140247.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g07650-like [Cucumis sativus]
           gi|449481221|ref|XP_004156118.1| PREDICTED: probable LRR
           receptor-like serine/threonine-protein kinase
           At1g07650-like [Cucumis sativus]
          Length = 1028

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/119 (57%), Positives = 83/119 (69%)
 Frame = +2

Query: 155 FTSFGSQTNPKLVITEVNALKAIATKLGKRGWDFTVDPCSNKGNWTPITIPKGFENLIEC 334
           F +FG     KL   EV ALK I  KLGK  WDF +DPCS +G W  +   KGFE+ + C
Sbjct: 27  FATFGLAAAAKLHREEVKALKEIEKKLGKNDWDFNIDPCSGEGKWHVVNGRKGFESSVTC 86

Query: 335 DCSFKKNSTCHVTKIWLKAQNLSGFLPPELNKLRFLKSLDLGRNVLSGSMPSEWATMQL 511
           DCSF  NSTCH+  I LK+QNLSG +PPE +KLRFLK LDL RN L+G +PS+WATM+L
Sbjct: 87  DCSFNHNSTCHIVAIALKSQNLSGIVPPEFSKLRFLKQLDLSRNCLTGFVPSQWATMRL 145


>emb|CBI22045.3| unnamed protein product [Vitis vinifera]
          Length = 1011

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/109 (60%), Positives = 81/109 (74%)
 Frame = +2

Query: 185 KLVITEVNALKAIATKLGKRGWDFTVDPCSNKGNWTPITIPKGFENLIECDCSFKKNSTC 364
           KL   E+ ALK I T+LGKR WDF  DPCS +GNW+ +   KG E+ + CDC+F  N++C
Sbjct: 24  KLPADELKALKVIGTRLGKRDWDFGKDPCSGEGNWSSVNEKKGVESSVTCDCTFHHNASC 83

Query: 365 HVTKIWLKAQNLSGFLPPELNKLRFLKSLDLGRNVLSGSMPSEWATMQL 511
           HV  I LKAQNLSG LPPEL+KL  LK LDL RN+ SGS+PS+WATM+L
Sbjct: 84  HVVTIALKAQNLSGSLPPELSKLYHLKHLDLSRNLFSGSIPSQWATMRL 132


>ref|XP_003519558.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g07650-like [Glycine max]
          Length = 1025

 Score =  141 bits (356), Expect = 5e-32
 Identities = 65/119 (54%), Positives = 81/119 (68%)
 Frame = +2

Query: 155 FTSFGSQTNPKLVITEVNALKAIATKLGKRGWDFTVDPCSNKGNWTPITIPKGFENLIEC 334
           F    S   PKL   EV ALK I +K+GK+ WDF VDPCS KGNW      KGFE+ + C
Sbjct: 25  FPQLASAATPKLNTQEVKALKEIGSKIGKKDWDFGVDPCSGKGNWNVSDARKGFESSVIC 84

Query: 335 DCSFKKNSTCHVTKIWLKAQNLSGFLPPELNKLRFLKSLDLGRNVLSGSMPSEWATMQL 511
           DCSF  NS+CHV  I LKAQNLSG L P+ +KL  L+ LDL RN+++G++P +W TM+L
Sbjct: 85  DCSFDHNSSCHVVSISLKAQNLSGSLSPDFSKLHHLQELDLSRNIITGAIPPQWGTMRL 143


>ref|XP_003617471.1| BED finger-nbs resistance protein [Medicago truncatula]
           gi|355518806|gb|AET00430.1| BED finger-nbs resistance
           protein [Medicago truncatula]
          Length = 1039

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/116 (56%), Positives = 78/116 (67%)
 Frame = +2

Query: 164 FGSQTNPKLVITEVNALKAIATKLGKRGWDFTVDPCSNKGNWTPITIPKGFENLIECDCS 343
           F S    KL   EV ALK I  K+GK+ WDF VDPCS KG W      KGFE+ + C+CS
Sbjct: 23  FASAATLKLNTQEVKALKEIGNKIGKKDWDFGVDPCSGKGKWNVSDSRKGFESAVICNCS 82

Query: 344 FKKNSTCHVTKIWLKAQNLSGFLPPELNKLRFLKSLDLGRNVLSGSMPSEWATMQL 511
           F  NS+CHV  I+LKAQNLSG L PE +KL  LK LDL RN+++GS+P +WA M L
Sbjct: 83  FNHNSSCHVVSIFLKAQNLSGTLSPEFSKLPHLKILDLSRNIITGSIPQQWAKMNL 138


>ref|NP_172244.2| putative LRR receptor-like serine/threonine-protein kinase
           [Arabidopsis thaliana]
           gi|264664462|sp|C0LGE0.1|Y1765_ARATH RecName:
           Full=Probable LRR receptor-like serine/threonine-protein
           kinase At1g07650; Flags: Precursor
           gi|224589382|gb|ACN59225.1| leucine-rich repeat
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|332190034|gb|AEE28155.1| putative LRR receptor-like
           serine/threonine-protein kinase [Arabidopsis thaliana]
          Length = 1014

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/118 (58%), Positives = 83/118 (70%), Gaps = 2/118 (1%)
 Frame = +2

Query: 167 GSQTNPKLVITEVNALKAIATKLGKRGWDFTVDPCSNKGNWTPITIP-KGFENLIECDCS 343
           G   N KL   EV ALK I  KLGK+ WDF  DPCS +G W   T   KGFE+ I CDCS
Sbjct: 23  GFSDNNKLHEAEVRALKEIGKKLGKKDWDFNKDPCSGEGTWIVTTYTTKGFESNITCDCS 82

Query: 344 F-KKNSTCHVTKIWLKAQNLSGFLPPELNKLRFLKSLDLGRNVLSGSMPSEWATMQLE 514
           F  +NS+CHV +I LK+QNL+G +PPE +KLR LK LDL RN L+GS+P EWA+M+LE
Sbjct: 83  FLPQNSSCHVIRIALKSQNLTGIVPPEFSKLRHLKVLDLSRNSLTGSIPKEWASMRLE 140


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