BLASTX nr result

ID: Coptis23_contig00039276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039276
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274808.1| PREDICTED: multidrug and toxin extrusion pro...   118   4e-25
ref|XP_002318258.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_003516689.1| PREDICTED: MATE efflux family protein 6-like...   117   7e-25
emb|CBI34748.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002276226.1| PREDICTED: multidrug and toxin extrusion pro...   117   1e-24

>ref|XP_002274808.1| PREDICTED: multidrug and toxin extrusion protein 2-like [Vitis
           vinifera]
          Length = 534

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/65 (90%), Positives = 64/65 (98%)
 Frame = -3

Query: 198 EIMILLCGLLINPRATVASMGVLIQTTALIYIFPSSLSFSVSTRVGNELGANQPSKAKLA 19
           EIMILLCGLL+NPRATVASMG+LIQTT+LIYIFPSSLSFSVSTRVGNELGANQP+KAK A
Sbjct: 301 EIMILLCGLLLNPRATVASMGILIQTTSLIYIFPSSLSFSVSTRVGNELGANQPNKAKCA 360

Query: 18  AVIGL 4
           A+IGL
Sbjct: 361 AIIGL 365


>ref|XP_002318258.1| predicted protein [Populus trichocarpa] gi|222858931|gb|EEE96478.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/65 (92%), Positives = 63/65 (96%)
 Frame = -3

Query: 198 EIMILLCGLLINPRATVASMGVLIQTTALIYIFPSSLSFSVSTRVGNELGANQPSKAKLA 19
           EIMILLCGLL+NPRATVASMG+LIQTTALIYIFPSSLSFSVSTRVGNELGANQP KAKLA
Sbjct: 251 EIMILLCGLLLNPRATVASMGILIQTTALIYIFPSSLSFSVSTRVGNELGANQPMKAKLA 310

Query: 18  AVIGL 4
           A +GL
Sbjct: 311 ANVGL 315


>ref|XP_003516689.1| PREDICTED: MATE efflux family protein 6-like [Glycine max]
          Length = 541

 Score =  117 bits (294), Expect = 7e-25
 Identities = 59/66 (89%), Positives = 63/66 (95%)
 Frame = -3

Query: 198 EIMILLCGLLINPRATVASMGVLIQTTALIYIFPSSLSFSVSTRVGNELGANQPSKAKLA 19
           EIMILLCGLLINP+ATVASMGVLIQTTALIYIFPSSLSF+VSTRVGNELGA  P KAKLA
Sbjct: 311 EIMILLCGLLINPQATVASMGVLIQTTALIYIFPSSLSFAVSTRVGNELGAENPKKAKLA 370

Query: 18  AVIGLC 1
           A++GLC
Sbjct: 371 ALVGLC 376


>emb|CBI34748.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/65 (87%), Positives = 64/65 (98%)
 Frame = -3

Query: 198 EIMILLCGLLINPRATVASMGVLIQTTALIYIFPSSLSFSVSTRVGNELGANQPSKAKLA 19
           EIMILLCGLL+NPRATVASMG+LIQTTALIYIFPSSLSFS+STRVGNELGAN+P KA+LA
Sbjct: 281 EIMILLCGLLLNPRATVASMGILIQTTALIYIFPSSLSFSLSTRVGNELGANRPEKARLA 340

Query: 18  AVIGL 4
           A++GL
Sbjct: 341 AIVGL 345


>ref|XP_002276226.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Vitis
           vinifera]
          Length = 530

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/65 (87%), Positives = 64/65 (98%)
 Frame = -3

Query: 198 EIMILLCGLLINPRATVASMGVLIQTTALIYIFPSSLSFSVSTRVGNELGANQPSKAKLA 19
           EIMILLCGLL+NPRATVASMG+LIQTTALIYIFPSSLSFS+STRVGNELGAN+P KA+LA
Sbjct: 307 EIMILLCGLLLNPRATVASMGILIQTTALIYIFPSSLSFSLSTRVGNELGANRPEKARLA 366

Query: 18  AVIGL 4
           A++GL
Sbjct: 367 AIVGL 371


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