BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039268
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269599.2| PREDICTED: calmodulin-binding transcription ...    70   2e-16
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...    65   2e-16
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    74   5e-16
ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [S...    70   5e-16
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    67   6e-16

>ref|XP_002269599.2| PREDICTED: calmodulin-binding transcription activator 3-like [Vitis
           vinifera]
          Length = 1702

 Score = 70.5 bits (171), Expect(2) = 2e-16
 Identities = 31/80 (38%), Positives = 46/80 (57%)
 Frame = +1

Query: 46  DKVSAAIEGW*TSLLSQAGRTTLIKTVA*AIPIYSLSSFALPFGTTSKLDKLYRDFWWRG 225
           +KV   +  W    +S+ GR TLIK+   ++P+Y +S F +P     +L+KL RDF W G
Sbjct: 282 EKVRRRLALWKRQYISKGGRITLIKSTLASMPLYKMSLFRMPKSVARRLEKLQRDFLWEG 341

Query: 226 SRTSKSVHLCKWESICQKKK 285
           +   K  HL KWE +C  K+
Sbjct: 342 ANGGKKAHLVKWEVVCADKE 361



 Score = 39.7 bits (91), Expect(2) = 2e-16
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 281 KSEGGLGLRLFKHINLALLSKLYWKIINGEESIWRSIM 394
           K +GGLGLR    +N ALL K  W+    +E IW+ ++
Sbjct: 360 KEKGGLGLRKLACLNKALLGKWIWRFARAKEDIWKKVL 397


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
           putative protein [Arabidopsis thaliana]
          Length = 947

 Score = 64.7 bits (156), Expect(2) = 2e-16
 Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
 Frame = +1

Query: 10  LSQKIRISSF--LIDKVSAAIEGW*TSLLSQAGRTTLIKTVA*AIPIYSLSSFALPFGTT 183
           L ++I   +F  ++++VS+ + GW    LS AGR TL K+V   IPI+++S+ +LP  T 
Sbjct: 433 LQRRINKDTFGEVLERVSSRLAGWKGRSLSFAGRLTLTKSVLSLIPIHTMSTISLPQSTL 492

Query: 184 SKLDKLYRDFWWRGSRTSKSVHLCKWESICQKK 282
             LDKL R F    S   K +HL  W+ +C  K
Sbjct: 493 EGLDKLARVFLLGSSAEKKKLHLVAWDRVCLPK 525



 Score = 45.4 bits (106), Expect(2) = 2e-16
 Identities = 20/38 (52%), Positives = 28/38 (73%)
 Frame = +2

Query: 281 KSEGGLGLRLFKHINLALLSKLYWKIINGEESIWRSIM 394
           KSEGGLG+R  K +N AL+SK+ W++IN   S+W  I+
Sbjct: 525 KSEGGLGIRTSKCMNKALVSKVGWRLINDRYSLWARIL 562


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 73.6 bits (179), Expect(2) = 5e-16
 Identities = 32/88 (36%), Positives = 49/88 (55%)
 Frame = +1

Query: 19  KIRISSFLIDKVSAAIEGW*TSLLSQAGRTTLIKTVA*AIPIYSLSSFALPFGTTSKLDK 198
           K ++ SF+ D++ + I GW    LS+ G+  +IK+VA  +P Y +S F LP   TSKL  
Sbjct: 545 KTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTS 604

Query: 199 LYRDFWWRGSRTSKSVHLCKWESICQKK 282
               FWW  +  S+ +H   W+ +C  K
Sbjct: 605 AVAKFWWSSNGDSRGMHWMAWDKLCSSK 632



 Score = 35.4 bits (80), Expect(2) = 5e-16
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 281 KSEGGLGLRLFKHINLALLSKLYWKIINGEESIWRSI 391
           KS+GGLG R     N ALL+K  W++I   +S++  +
Sbjct: 632 KSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKV 668


>ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [Sorghum bicolor]
           gi|241946107|gb|EES19252.1| hypothetical protein
           SORBIDRAFT_09g007400 [Sorghum bicolor]
          Length = 835

 Score = 70.5 bits (171), Expect(2) = 5e-16
 Identities = 34/82 (41%), Positives = 48/82 (58%)
 Frame = +1

Query: 40  LIDKVSAAIEGW*TSLLSQAGRTTLIKTVA*AIPIYSLSSFALPFGTTSKLDKLYRDFWW 219
           LIDK    ++ W    +S AGR+TLI +     PIY +S + LP     +LDK+ R+F+W
Sbjct: 389 LIDKSMKKLDIWKGGNMSIAGRSTLISSSLNNAPIYHMSIYLLPKSVIGRLDKIRRNFFW 448

Query: 220 RGSRTSKSVHLCKWESICQKKK 285
           +G  T +  HL KW  IC+ KK
Sbjct: 449 QGGSTKQKYHLIKWTKICRSKK 470



 Score = 38.5 bits (88), Expect(2) = 5e-16
 Identities = 15/40 (37%), Positives = 29/40 (72%)
 Frame = +2

Query: 275 RKKSEGGLGLRLFKHINLALLSKLYWKIINGEESIWRSIM 394
           R K +GG+G++  + +N++LL K +WK+ N E+ +W+ I+
Sbjct: 467 RSKKKGGIGIKDIRKMNVSLLIKWWWKLDN-EDDVWQKII 505


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 66.6 bits (161), Expect(2) = 6e-16
 Identities = 32/81 (39%), Positives = 45/81 (55%)
 Frame = +1

Query: 40  LIDKVSAAIEGW*TSLLSQAGRTTLIKTVA*AIPIYSLSSFALPFGTTSKLDKLYRDFWW 219
           ++++VSA + GW    LS AGR TL K V  +IP++ +S+  LP  T   LD+  R F W
Sbjct: 631 VLERVSARLAGWKGRSLSLAGRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLW 690

Query: 220 RGSRTSKSVHLCKWESICQKK 282
             +   K  HL  W  IC+ K
Sbjct: 691 GSTMEKKKQHLLSWRKICKPK 711



 Score = 42.0 bits (97), Expect(2) = 6e-16
 Identities = 15/40 (37%), Positives = 30/40 (75%)
 Frame = +2

Query: 275 RKKSEGGLGLRLFKHINLALLSKLYWKIINGEESIWRSIM 394
           + K+EGG+GLR  + +N AL++K+ W+++  +ES+W  ++
Sbjct: 709 KPKAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWARVV 748