BLASTX nr result

ID: Coptis23_contig00039242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039242
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279543.2| PREDICTED: uncharacterized protein LOC100253...   108   6e-22
emb|CBI16864.3| unnamed protein product [Vitis vinifera]              108   6e-22
emb|CAN63828.1| hypothetical protein VITISV_006636 [Vitis vinifera]   108   6e-22
ref|XP_002305959.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_003637480.1| hypothetical protein MTR_087s0018, partial [...    94   9e-18

>ref|XP_002279543.2| PREDICTED: uncharacterized protein LOC100253124 [Vitis vinifera]
          Length = 647

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/75 (64%), Positives = 61/75 (81%)
 Frame = -2

Query: 277 YSLSMRTPQYKWIQDFTAFDKLLIITAGNNGLVYVTVPVSALVFALDAITGSLLWQKSIG 98
           YSLS+R+PQ+KWIQDF++FDK+  IT GNNG +YVTVPV  LV ALD  TG++LWQ++ G
Sbjct: 192 YSLSVRSPQFKWIQDFSSFDKVFTITPGNNGCLYVTVPVRVLVLALDVTTGNILWQRNTG 251

Query: 97  ALSTADCSPVVDLYG 53
            LST +C+PVVD  G
Sbjct: 252 PLSTTECAPVVDSNG 266


>emb|CBI16864.3| unnamed protein product [Vitis vinifera]
          Length = 1165

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/75 (64%), Positives = 61/75 (81%)
 Frame = -2

Query: 277 YSLSMRTPQYKWIQDFTAFDKLLIITAGNNGLVYVTVPVSALVFALDAITGSLLWQKSIG 98
           YSLS+R+PQ+KWIQDF++FDK+  IT GNNG +YVTVPV  LV ALD  TG++LWQ++ G
Sbjct: 110 YSLSVRSPQFKWIQDFSSFDKVFTITPGNNGCLYVTVPVRVLVLALDVTTGNILWQRNTG 169

Query: 97  ALSTADCSPVVDLYG 53
            LST +C+PVVD  G
Sbjct: 170 PLSTTECAPVVDSNG 184


>emb|CAN63828.1| hypothetical protein VITISV_006636 [Vitis vinifera]
          Length = 1017

 Score =  108 bits (269), Expect = 6e-22
 Identities = 48/75 (64%), Positives = 61/75 (81%)
 Frame = -2

Query: 277 YSLSMRTPQYKWIQDFTAFDKLLIITAGNNGLVYVTVPVSALVFALDAITGSLLWQKSIG 98
           YSLS+R+PQ+KWIQDF++FDK+  IT GNNG +YVTVPV  LV ALD  TG++LWQ++ G
Sbjct: 195 YSLSVRSPQFKWIQDFSSFDKVFTITPGNNGXLYVTVPVRVLVLALDVTTGNILWQRNTG 254

Query: 97  ALSTADCSPVVDLYG 53
            LST +C+PVVD  G
Sbjct: 255 PLSTTECAPVVDSNG 269


>ref|XP_002305959.1| predicted protein [Populus trichocarpa] gi|222848923|gb|EEE86470.1|
           predicted protein [Populus trichocarpa]
          Length = 674

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 41/75 (54%), Positives = 55/75 (73%)
 Frame = -2

Query: 277 YSLSMRTPQYKWIQDFTAFDKLLIITAGNNGLVYVTVPVSALVFALDAITGSLLWQKSIG 98
           YSLS+R+P + W+QD ++FDK   +T GNNG +YVTVP  +LV  LD + G++LWQ SIG
Sbjct: 206 YSLSLRSPHFNWVQDLSSFDKNFTVTPGNNGRLYVTVPPLSLVLTLDVLKGNILWQTSIG 265

Query: 97  ALSTADCSPVVDLYG 53
            L +A+C PVVD  G
Sbjct: 266 PLGSAECEPVVDSNG 280


>ref|XP_003637480.1| hypothetical protein MTR_087s0018, partial [Medicago truncatula]
           gi|355503415|gb|AES84618.1| hypothetical protein
           MTR_087s0018, partial [Medicago truncatula]
          Length = 543

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 43/75 (57%), Positives = 54/75 (72%)
 Frame = -2

Query: 277 YSLSMRTPQYKWIQDFTAFDKLLIITAGNNGLVYVTVPVSALVFALDAITGSLLWQKSIG 98
           Y LS+R   ++WIQDF++ DK   IT GNNG +YVTVP  AL+ ALD  TG++LWQ S+G
Sbjct: 200 YCLSVRGRDFRWIQDFSSLDKSFTITPGNNGHLYVTVPTRALILALDVFTGNILWQGSVG 259

Query: 97  ALSTADCSPVVDLYG 53
            LS  DC+PVVD  G
Sbjct: 260 PLSKIDCAPVVDSNG 274


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