BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039217
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17913.3| unnamed protein product [Vitis vinifera]              372   e-101
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]     372   e-101
ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|2...   363   2e-98
dbj|BAF03051.1| DNA ligase IV [Populus nigra]                         362   4e-98
ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]        358   3e-97

>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score =  372 bits (956), Expect = e-101
 Identities = 179/210 (85%), Positives = 197/210 (93%)
 Frame = -3

Query: 631 EVLQRRQSLSSGGLTILELNVLLDRLSASENRAEKTGVLAELIKKTNAQEMKWIVMIILK 452
           EVLQRRQ ++SGGLTI ELN LLD L++SENR EKT VL+ LIKKTNAQEMKWIVMIILK
Sbjct: 111 EVLQRRQGMTSGGLTIKELNDLLDCLASSENRTEKTSVLSTLIKKTNAQEMKWIVMIILK 170

Query: 451 DLKLGTSEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRSKRHKRQDIEIGKAVRPQLAL 272
           DLKLG SEKSIFHEFHPDAEDLFNVTCDLKLVCEKL+DRS+RHKRQDIE+GKAVRPQLA+
Sbjct: 171 DLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAM 230

Query: 271 RISDAAAAWKKLHGKEVIVECKFDGDRIQIHKSGAEIHFFSRNFLDHPEYEHAMSNIIKE 92
           R++DA AAWKKLHGKEV+VECKFDGDRIQIHK+G EIHFFSRNFLDHPEY++AMSNI+ +
Sbjct: 231 RVADATAAWKKLHGKEVVVECKFDGDRIQIHKNGEEIHFFSRNFLDHPEYKYAMSNIVAQ 290

Query: 91  NILVDRCILDGEMLVWDTSTNRFAEFGSNQ 2
           N+LVDRCILDGEMLVWD S NRFAEFGSNQ
Sbjct: 291 NLLVDRCILDGEMLVWDISLNRFAEFGSNQ 320


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score =  372 bits (956), Expect = e-101
 Identities = 179/210 (85%), Positives = 197/210 (93%)
 Frame = -3

Query: 631 EVLQRRQSLSSGGLTILELNVLLDRLSASENRAEKTGVLAELIKKTNAQEMKWIVMIILK 452
           EVLQRRQ ++SGGLTI ELN LLD L++SENR EKT VL+ LIKKTNAQEMKWIVMIILK
Sbjct: 111 EVLQRRQGMTSGGLTIKELNDLLDCLASSENRTEKTSVLSTLIKKTNAQEMKWIVMIILK 170

Query: 451 DLKLGTSEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRSKRHKRQDIEIGKAVRPQLAL 272
           DLKLG SEKSIFHEFHPDAEDLFNVTCDLKLVCEKL+DRS+RHKRQDIE+GKAVRPQLA+
Sbjct: 171 DLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAM 230

Query: 271 RISDAAAAWKKLHGKEVIVECKFDGDRIQIHKSGAEIHFFSRNFLDHPEYEHAMSNIIKE 92
           R++DA AAWKKLHGKEV+VECKFDGDRIQIHK+G EIHFFSRNFLDHPEY++AMSNI+ +
Sbjct: 231 RVADATAAWKKLHGKEVVVECKFDGDRIQIHKNGEEIHFFSRNFLDHPEYKYAMSNIVAQ 290

Query: 91  NILVDRCILDGEMLVWDTSTNRFAEFGSNQ 2
           N+LVDRCILDGEMLVWD S NRFAEFGSNQ
Sbjct: 291 NLLVDRCILDGEMLVWDISLNRFAEFGSNQ 320


>ref|XP_002325262.1| predicted protein [Populus trichocarpa] gi|222866696|gb|EEF03827.1|
           predicted protein [Populus trichocarpa]
          Length = 1242

 Score =  363 bits (931), Expect = 2e-98
 Identities = 174/210 (82%), Positives = 192/210 (91%)
 Frame = -3

Query: 631 EVLQRRQSLSSGGLTILELNVLLDRLSASENRAEKTGVLAELIKKTNAQEMKWIVMIILK 452
           EVLQRRQ   SGGLTI ELN LLD+L++SENR EKT VLA LI KTN QEMKWI+MIILK
Sbjct: 120 EVLQRRQGTVSGGLTIEELNGLLDKLASSENRGEKTAVLAALINKTNTQEMKWIIMIILK 179

Query: 451 DLKLGTSEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRSKRHKRQDIEIGKAVRPQLAL 272
           DLKLG SEKS+FHEFHPDAEDLFNVTCDLKLVCEKLRDR++RHKRQDIE+GKAVRPQLA+
Sbjct: 180 DLKLGMSEKSVFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAM 239

Query: 271 RISDAAAAWKKLHGKEVIVECKFDGDRIQIHKSGAEIHFFSRNFLDHPEYEHAMSNIIKE 92
           R+SDA AAWKKLHGKEV+VECKFDGDRIQIHK+GAE+H+FSRNFLDH EY H MS+II +
Sbjct: 240 RVSDAHAAWKKLHGKEVVVECKFDGDRIQIHKNGAEVHYFSRNFLDHSEYAHGMSDIIVQ 299

Query: 91  NILVDRCILDGEMLVWDTSTNRFAEFGSNQ 2
           N+L +RCILDGEMLVWDTS NRFAEFGSNQ
Sbjct: 300 NVLDERCILDGEMLVWDTSLNRFAEFGSNQ 329


>dbj|BAF03051.1| DNA ligase IV [Populus nigra]
          Length = 1319

 Score =  362 bits (928), Expect = 4e-98
 Identities = 173/210 (82%), Positives = 192/210 (91%)
 Frame = -3

Query: 631 EVLQRRQSLSSGGLTILELNVLLDRLSASENRAEKTGVLAELIKKTNAQEMKWIVMIILK 452
           EVLQRRQ   SGGLTI ELN LLD+L++SENR +KT VLA LI KTN QEMKWI+MIILK
Sbjct: 120 EVLQRRQGTVSGGLTIEELNGLLDKLASSENRGDKTAVLAALINKTNTQEMKWIIMIILK 179

Query: 451 DLKLGTSEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRSKRHKRQDIEIGKAVRPQLAL 272
           DLKLG SEKS+FHEFHPDAEDLFNVTCDLKLVCEKLRDR++RHKRQDIE+GKAVRPQLA+
Sbjct: 180 DLKLGMSEKSVFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAM 239

Query: 271 RISDAAAAWKKLHGKEVIVECKFDGDRIQIHKSGAEIHFFSRNFLDHPEYEHAMSNIIKE 92
           R+SDA AAWKKLHGKEV+VECKFDGDRIQIHK+GAE+H+FSRNFLDH EY H MS+II +
Sbjct: 240 RVSDAHAAWKKLHGKEVVVECKFDGDRIQIHKNGAEVHYFSRNFLDHSEYAHGMSDIIVQ 299

Query: 91  NILVDRCILDGEMLVWDTSTNRFAEFGSNQ 2
           N+L +RCILDGEMLVWDTS NRFAEFGSNQ
Sbjct: 300 NVLDERCILDGEMLVWDTSLNRFAEFGSNQ 329


>ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]
          Length = 1171

 Score =  358 bits (920), Expect = 3e-97
 Identities = 173/210 (82%), Positives = 192/210 (91%)
 Frame = -3

Query: 631 EVLQRRQSLSSGGLTILELNVLLDRLSASENRAEKTGVLAELIKKTNAQEMKWIVMIILK 452
           EVLQRRQ  +SGGLTI ELN LLDRL+++ENRAEK  VL+ LI+KTNAQEMKWI+MIILK
Sbjct: 111 EVLQRRQGTASGGLTIRELNELLDRLASAENRAEKILVLSTLIQKTNAQEMKWIIMIILK 170

Query: 451 DLKLGTSEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRSKRHKRQDIEIGKAVRPQLAL 272
           DLKLG SEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDR++RHKRQDIE+GKAVRPQLA 
Sbjct: 171 DLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAK 230

Query: 271 RISDAAAAWKKLHGKEVIVECKFDGDRIQIHKSGAEIHFFSRNFLDHPEYEHAMSNIIKE 92
           R+++A  AWKKLHGK+V+VECKFDGDRIQIHK+G EIHFFSRNF+DH EY HAMS II +
Sbjct: 231 RVANATEAWKKLHGKDVVVECKFDGDRIQIHKNGTEIHFFSRNFIDHSEYAHAMSEIIIQ 290

Query: 91  NILVDRCILDGEMLVWDTSTNRFAEFGSNQ 2
           N+LVDRCILDGEMLVWDTS  RFAEFGSNQ
Sbjct: 291 NVLVDRCILDGEMLVWDTSLKRFAEFGSNQ 320