BLASTX nr result

ID: Coptis23_contig00039201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039201
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248...   198   4e-49
emb|CBI24230.3| unnamed protein product [Vitis vinifera]              198   4e-49
ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinu...   196   2e-48
ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802...   195   4e-48
gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indi...   194   5e-48

>ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score =  198 bits (503), Expect = 4e-49
 Identities = 103/152 (67%), Positives = 119/152 (78%), Gaps = 6/152 (3%)
 Frame = +2

Query: 2   GRRGKPKFCPFRLANDESTLIWYSGKDEKQLKLSHVSRIIPGQRTAIFQRYPRPEKEYQS 181
           GRRGKPKFCPFRL+NDES LIW+SGK+EK LKLSHVSRII GQRT IFQRYPRPEKEYQS
Sbjct: 38  GRRGKPKFCPFRLSNDESVLIWFSGKEEKLLKLSHVSRIISGQRTPIFQRYPRPEKEYQS 97

Query: 182 FSLISNDRSLDLICKDKDEAEVWFVGLKALISR----RKSRHDSRTDGLAMDGST--NNA 343
           FSLI NDRSLDLICKDKDEAEVWF GLKALISR    RK R +SR+DG+  + ++     
Sbjct: 98  FSLIYNDRSLDLICKDKDEAEVWFSGLKALISRGGHHRKWRTESRSDGIPSEANSPRTYT 157

Query: 344 RRNASLVAAGGSGDLFPKDPGEAHRIENPSQS 439
           RR++ L +  GS D   KD G+  R+ +P +S
Sbjct: 158 RRSSPLNSPFGSADSLQKDGGDHLRLHSPYES 189


>emb|CBI24230.3| unnamed protein product [Vitis vinifera]
          Length = 953

 Score =  198 bits (503), Expect = 4e-49
 Identities = 103/152 (67%), Positives = 119/152 (78%), Gaps = 6/152 (3%)
 Frame = +2

Query: 2   GRRGKPKFCPFRLANDESTLIWYSGKDEKQLKLSHVSRIIPGQRTAIFQRYPRPEKEYQS 181
           GRRGKPKFCPFRL+NDES LIW+SGK+EK LKLSHVSRII GQRT IFQRYPRPEKEYQS
Sbjct: 32  GRRGKPKFCPFRLSNDESVLIWFSGKEEKLLKLSHVSRIISGQRTPIFQRYPRPEKEYQS 91

Query: 182 FSLISNDRSLDLICKDKDEAEVWFVGLKALISR----RKSRHDSRTDGLAMDGST--NNA 343
           FSLI NDRSLDLICKDKDEAEVWF GLKALISR    RK R +SR+DG+  + ++     
Sbjct: 92  FSLIYNDRSLDLICKDKDEAEVWFSGLKALISRGGHHRKWRTESRSDGIPSEANSPRTYT 151

Query: 344 RRNASLVAAGGSGDLFPKDPGEAHRIENPSQS 439
           RR++ L +  GS D   KD G+  R+ +P +S
Sbjct: 152 RRSSPLNSPFGSADSLQKDGGDHLRLHSPYES 183


>ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223548075|gb|EEF49567.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 1096

 Score =  196 bits (497), Expect = 2e-48
 Identities = 101/148 (68%), Positives = 117/148 (79%), Gaps = 5/148 (3%)
 Frame = +2

Query: 2   GRRGKPKFCPFRLANDESTLIWYSGKDEKQLKLSHVSRIIPGQRTAIFQRYPRPEKEYQS 181
           GRRGKPKFCPFRLANDES L+W SGK+EK LKLSHVSRII GQRT IFQRYPRPEKEYQS
Sbjct: 33  GRRGKPKFCPFRLANDESALVWLSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQS 92

Query: 182 FSLISNDRSLDLICKDKDEAEVWFVGLKALISR---RKSRHDSRTDGLAMDGSTNNA--R 346
           FSLI +DRSLDLICKDKDEAEVW  GLKALISR   RK R +SR+DG++ + ++  A  +
Sbjct: 93  FSLIYDDRSLDLICKDKDEAEVWITGLKALISRNHMRKGRGESRSDGISSEATSPRAHTQ 152

Query: 347 RNASLVAAGGSGDLFPKDPGEAHRIENP 430
           R++ L +A GSGD   KD  +  R+  P
Sbjct: 153 RSSPLSSAFGSGDSSQKDEIDPLRLRTP 180


>ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  195 bits (495), Expect = 4e-48
 Identities = 101/151 (66%), Positives = 118/151 (78%), Gaps = 5/151 (3%)
 Frame = +2

Query: 2   GRRGKPKFCPFRLANDESTLIWYSGKDEKQLKLSHVSRIIPGQRTAIFQRYPRPEKEYQS 181
           GRRG PKFCPFRL+NDES LIW+SGK+EK LKLSHVSRII GQRT IFQRYPRPEKEYQS
Sbjct: 37  GRRGTPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRIISGQRTPIFQRYPRPEKEYQS 96

Query: 182 FSLISNDRSLDLICKDKDEAEVWFVGLKALISR---RKSRHDSRTDGLAMDGST--NNAR 346
           FSLI NDRSLDLICKDKDEAEVWF GLKALISR   RK R +SR+DG+  + ++     R
Sbjct: 97  FSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHHRKWRTESRSDGIPSEANSPRTYTR 156

Query: 347 RNASLVAAGGSGDLFPKDPGEAHRIENPSQS 439
           R++ L +  GS +   KD G+  R+ +P +S
Sbjct: 157 RSSPLNSPFGSNESLQKDCGDHLRLHSPYES 187


>gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score =  194 bits (494), Expect = 5e-48
 Identities = 102/149 (68%), Positives = 120/149 (80%), Gaps = 6/149 (4%)
 Frame = +2

Query: 2   GRRGKPKFCPFRLANDESTLIWYSGKDEKQLKLSHVSRIIPGQRTAIFQRYPRPEKEYQS 181
           GRRGKPKFCPFRL+NDES LIW+SGK+EKQL+LSHVSRIIPGQRTAIFQRYPRPEKE QS
Sbjct: 83  GRRGKPKFCPFRLSNDESILIWFSGKEEKQLRLSHVSRIIPGQRTAIFQRYPRPEKECQS 142

Query: 182 FSLISNDRSLDLICKDKDEAEVWFVGLKALISR---RKSRHDSRTDGLAMDGSTN---NA 343
           FSLIS+DRSLD+ICKDKDEAEVWF GLK LI+R   RK R +SR+D L+  G+T+     
Sbjct: 143 FSLISHDRSLDIICKDKDEAEVWFAGLKTLITRSHQRKWRTESRSDMLS-SGTTSPRTYT 201

Query: 344 RRNASLVAAGGSGDLFPKDPGEAHRIENP 430
           RR++ L +   S D   KD GE +R+ +P
Sbjct: 202 RRSSPLSSPFSSNDSVHKDGGENYRLRSP 230


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