BLASTX nr result

ID: Coptis23_contig00039199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039199
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528406.1| Receptor protein kinase CLAVATA1 precursor, ...   188   3e-46
ref|XP_002324522.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002309364.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002274639.2| PREDICTED: putative leucine-rich repeat rece...   185   4e-45
emb|CBI36558.3| unnamed protein product [Vitis vinifera]              185   4e-45

>ref|XP_002528406.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus
           communis] gi|223532194|gb|EEF33999.1| Receptor protein
           kinase CLAVATA1 precursor, putative [Ricinus communis]
          Length = 960

 Score =  188 bits (478), Expect = 3e-46
 Identities = 93/130 (71%), Positives = 109/130 (83%)
 Frame = -2

Query: 390 RARQMRKSTIFSENVYDDEEQDRTQPKYPRISYQQLVEATGGFNSSGLIGSGKFGSIYKG 211
           R +  ++  IF++   +DEE++  + KYPRISYQQLV+ATGGF++S LIGSG+FG +YKG
Sbjct: 600 RYKYRKQLAIFNQGNMEDEEKETKELKYPRISYQQLVDATGGFSASSLIGSGRFGHVYKG 659

Query: 210 TLQDNTRIAVKVLNSKIAGEISESFKRECQVLKRTRHRNLIRIITACSSPDFKALVLPLM 31
            LQDNTRIAVKVL+SK AG IS SFKRECQVLKR RHRNLIRIIT CS PDFKALVLPLM
Sbjct: 660 VLQDNTRIAVKVLDSKTAGAISGSFKRECQVLKRARHRNLIRIITICSKPDFKALVLPLM 719

Query: 30  SNGSLENHLY 1
           SNGSLE +LY
Sbjct: 720 SNGSLERYLY 729


>ref|XP_002324522.1| predicted protein [Populus trichocarpa] gi|222865956|gb|EEF03087.1|
           predicted protein [Populus trichocarpa]
          Length = 860

 Score =  186 bits (472), Expect = 2e-45
 Identities = 92/130 (70%), Positives = 107/130 (82%)
 Frame = -2

Query: 390 RARQMRKSTIFSENVYDDEEQDRTQPKYPRISYQQLVEATGGFNSSGLIGSGKFGSIYKG 211
           R+R  RK  IF+     DE+++    K+PRISY+QL+EATGGF++S LIGSG+FG +YKG
Sbjct: 509 RSRFRRKMVIFNGGDLGDEDKETKDLKHPRISYRQLIEATGGFSASSLIGSGRFGHVYKG 568

Query: 210 TLQDNTRIAVKVLNSKIAGEISESFKRECQVLKRTRHRNLIRIITACSSPDFKALVLPLM 31
            LQDNTRIAVKVL+SK  GEIS SFKRECQVLKR +HRNLI+IIT CS PDFKALVLPLM
Sbjct: 569 VLQDNTRIAVKVLDSKEDGEISRSFKRECQVLKRAKHRNLIKIITTCSKPDFKALVLPLM 628

Query: 30  SNGSLENHLY 1
           SNGSLE HLY
Sbjct: 629 SNGSLEGHLY 638


>ref|XP_002309364.1| predicted protein [Populus trichocarpa] gi|222855340|gb|EEE92887.1|
            predicted protein [Populus trichocarpa]
          Length = 981

 Score =  186 bits (471), Expect = 2e-45
 Identities = 90/130 (69%), Positives = 109/130 (83%)
 Frame = -2

Query: 390  RARQMRKSTIFSENVYDDEEQDRTQPKYPRISYQQLVEATGGFNSSGLIGSGKFGSIYKG 211
            R++  R+  IF+    +DE+++    K+PRISY+QL+EATGGF++S LIGSG+FG +YKG
Sbjct: 623  RSKFRRQMVIFNRGDLEDEDKETKDLKHPRISYRQLIEATGGFSASSLIGSGQFGHVYKG 682

Query: 210  TLQDNTRIAVKVLNSKIAGEISESFKRECQVLKRTRHRNLIRIITACSSPDFKALVLPLM 31
             LQDNTRIAVKVL++K AGEIS SFKRECQVLKR +HRNLI+IIT CS PDFKALVLPLM
Sbjct: 683  VLQDNTRIAVKVLDTKTAGEISGSFKRECQVLKRAKHRNLIKIITICSKPDFKALVLPLM 742

Query: 30   SNGSLENHLY 1
            SNGSLE HLY
Sbjct: 743  SNGSLERHLY 752


>ref|XP_002274639.2| PREDICTED: putative leucine-rich repeat receptor-like
            serine/threonine-protein kinase At2g24130-like [Vitis
            vinifera]
          Length = 975

 Score =  185 bits (469), Expect = 4e-45
 Identities = 92/125 (73%), Positives = 106/125 (84%)
 Frame = -2

Query: 375  RKSTIFSENVYDDEEQDRTQPKYPRISYQQLVEATGGFNSSGLIGSGKFGSIYKGTLQDN 196
            R   IF+    ++ EQ+R + KYPRI+++QLVEATGGF+SS LIGSG+FG +YKG L+DN
Sbjct: 629  RPLAIFNGTDMEEGEQERKELKYPRITHRQLVEATGGFSSSSLIGSGRFGHVYKGVLRDN 688

Query: 195  TRIAVKVLNSKIAGEISESFKRECQVLKRTRHRNLIRIITACSSPDFKALVLPLMSNGSL 16
            TRIAVKVL+S+IA EIS SFKRECQVLKRTRHRNLIRIIT CS PDFKALVLPLMSNG L
Sbjct: 689  TRIAVKVLDSRIAAEISGSFKRECQVLKRTRHRNLIRIITICSKPDFKALVLPLMSNGCL 748

Query: 15   ENHLY 1
            E HLY
Sbjct: 749  ERHLY 753


>emb|CBI36558.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score =  185 bits (469), Expect = 4e-45
 Identities = 92/125 (73%), Positives = 106/125 (84%)
 Frame = -2

Query: 375 RKSTIFSENVYDDEEQDRTQPKYPRISYQQLVEATGGFNSSGLIGSGKFGSIYKGTLQDN 196
           R   IF+    ++ EQ+R + KYPRI+++QLVEATGGF+SS LIGSG+FG +YKG L+DN
Sbjct: 570 RPLAIFNGTDMEEGEQERKELKYPRITHRQLVEATGGFSSSSLIGSGRFGHVYKGVLRDN 629

Query: 195 TRIAVKVLNSKIAGEISESFKRECQVLKRTRHRNLIRIITACSSPDFKALVLPLMSNGSL 16
           TRIAVKVL+S+IA EIS SFKRECQVLKRTRHRNLIRIIT CS PDFKALVLPLMSNG L
Sbjct: 630 TRIAVKVLDSRIAAEISGSFKRECQVLKRTRHRNLIRIITICSKPDFKALVLPLMSNGCL 689

Query: 15  ENHLY 1
           E HLY
Sbjct: 690 ERHLY 694


Top