BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039179
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323859.1| condensin complex components subunit [Populu...   295   3e-78
ref|XP_003543852.1| PREDICTED: structural maintenance of chromos...   293   1e-77
ref|XP_002534418.1| Structural maintenance of chromosome, putati...   292   2e-77
ref|XP_003633856.1| PREDICTED: structural maintenance of chromos...   291   4e-77
emb|CBI22212.3| unnamed protein product [Vitis vinifera]              291   4e-77

>ref|XP_002323859.1| condensin complex components subunit [Populus trichocarpa]
           gi|222866861|gb|EEF03992.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 1256

 Score =  295 bits (755), Expect = 3e-78
 Identities = 148/162 (91%), Positives = 153/162 (94%)
 Frame = +2

Query: 26  TNSTSKSRNPRLFIKEMVMTNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF 205
           T++   S+ PRLFIKEM+M NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF
Sbjct: 20  TSAGGSSKAPRLFIKEMIMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVF 79

Query: 206 GKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGGYEAVAGSDFVITRVAF 385
           GKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDG YEAV+GSDFVITRVAF
Sbjct: 80  GKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGTYEAVSGSDFVITRVAF 139

Query: 386 RDNSSKYYINDRGSTFTEVTKKLKEKGVDLDNNRFLILQGEV 511
           RDNSSKYYINDR S FTEVTKKLK KGVDLDNNRFLILQGEV
Sbjct: 140 RDNSSKYYINDRSSNFTEVTKKLKGKGVDLDNNRFLILQGEV 181


>ref|XP_003543852.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Glycine max]
          Length = 1319

 Score =  293 bits (749), Expect = 1e-77
 Identities = 150/166 (90%), Positives = 153/166 (92%)
 Frame = +2

Query: 14  PTESTNSTSKSRNPRLFIKEMVMTNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAM 193
           P  +T   S +R PRLFIKEMVM NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAM
Sbjct: 86  PDSATRRRSSAR-PRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAM 144

Query: 194 LFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGGYEAVAGSDFVIT 373
           LFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEI+D DDG YEAVAGSDFVIT
Sbjct: 145 LFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDSDDGTYEAVAGSDFVIT 204

Query: 374 RVAFRDNSSKYYINDRGSTFTEVTKKLKEKGVDLDNNRFLILQGEV 511
           RVAFRDNSSKYYINDR S FTEVTKKLK KGVDLDNNRFLILQGEV
Sbjct: 205 RVAFRDNSSKYYINDRTSNFTEVTKKLKGKGVDLDNNRFLILQGEV 250


>ref|XP_002534418.1| Structural maintenance of chromosome, putative [Ricinus communis]
           gi|223525329|gb|EEF27966.1| Structural maintenance of
           chromosome, putative [Ricinus communis]
          Length = 1259

 Score =  292 bits (748), Expect = 2e-77
 Identities = 149/170 (87%), Positives = 155/170 (91%), Gaps = 1/170 (0%)
 Frame = +2

Query: 5   MGTPTESTNST-SKSRNPRLFIKEMVMTNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNV 181
           M   +++  +T S ++ PRLFIKEMVM NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNV
Sbjct: 7   MANESDTVGATGSSNKPPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNV 66

Query: 182 IDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGGYEAVAGSD 361
           IDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDG YE V  SD
Sbjct: 67  IDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGNYEVVPRSD 126

Query: 362 FVITRVAFRDNSSKYYINDRGSTFTEVTKKLKEKGVDLDNNRFLILQGEV 511
           FVITRVAFRDNSSKYYINDRGS FTEVTKKLK KGVDLDNNRFLILQGEV
Sbjct: 127 FVITRVAFRDNSSKYYINDRGSNFTEVTKKLKGKGVDLDNNRFLILQGEV 176


>ref|XP_003633856.1| PREDICTED: structural maintenance of chromosomes protein 4-like
           [Vitis vinifera]
          Length = 1486

 Score =  291 bits (745), Expect = 4e-77
 Identities = 147/163 (90%), Positives = 151/163 (92%)
 Frame = +2

Query: 23  STNSTSKSRNPRLFIKEMVMTNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFV 202
           S +   +SR PRLFIKEMVM NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFV
Sbjct: 255 SDSGPGRSRAPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFV 314

Query: 203 FGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGGYEAVAGSDFVITRVA 382
           FGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEI+DLDDG YEAV GSDFVI RVA
Sbjct: 315 FGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDLDDGTYEAVPGSDFVIARVA 374

Query: 383 FRDNSSKYYINDRGSTFTEVTKKLKEKGVDLDNNRFLILQGEV 511
           F+DNSSKYYINDR S FTEVTKKLK KGVDLDNNRFLILQGEV
Sbjct: 375 FQDNSSKYYINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEV 417


>emb|CBI22212.3| unnamed protein product [Vitis vinifera]
          Length = 1253

 Score =  291 bits (745), Expect = 4e-77
 Identities = 147/163 (90%), Positives = 151/163 (92%)
 Frame = +2

Query: 23  STNSTSKSRNPRLFIKEMVMTNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFV 202
           S +   +SR PRLFIKEMVM NFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFV
Sbjct: 16  SDSGPGRSRAPRLFIKEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFV 75

Query: 203 FGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGGYEAVAGSDFVITRVA 382
           FGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEI+DLDDG YEAV GSDFVI RVA
Sbjct: 76  FGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIVDLDDGTYEAVPGSDFVIARVA 135

Query: 383 FRDNSSKYYINDRGSTFTEVTKKLKEKGVDLDNNRFLILQGEV 511
           F+DNSSKYYINDR S FTEVTKKLK KGVDLDNNRFLILQGEV
Sbjct: 136 FQDNSSKYYINDRPSNFTEVTKKLKGKGVDLDNNRFLILQGEV 178