BLASTX nr result

ID: Coptis23_contig00039168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039168
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19487.3| unnamed protein product [Vitis vinifera]              210   1e-52
ref|XP_002284938.1| PREDICTED: protein SSH4-like [Vitis vinifera]     210   1e-52
ref|XP_003589150.1| Protein ssh4 [Medicago truncatula] gi|355478...   196   2e-48
ref|XP_002510180.1| conserved hypothetical protein [Ricinus comm...   194   6e-48
ref|XP_003545323.1| PREDICTED: uncharacterized protein LOC100788...   188   5e-46

>emb|CBI19487.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  210 bits (534), Expect = 1e-52
 Identities = 99/141 (70%), Positives = 115/141 (81%)
 Frame = +1

Query: 1   CGFNPSQKKVFFTIDSELVHVIHCKSDEFGSPLYPTLAANIDITVVVNFGQRPFKYAPAN 180
           CGF+PSQKKVFFTIDSELVHV+HCKS+EFGSPLYPTL AN D+ V+VNFGQ  F YAPAN
Sbjct: 57  CGFDPSQKKVFFTIDSELVHVVHCKSEEFGSPLYPTLGANTDVEVLVNFGQSMFSYAPAN 116

Query: 181 SHRTTNPCFIRSVTNGHTATLGYEDSKELFSIGRIDAEWLNRCTTKSSHSTINNDNRNVE 360
           + RT NPCFI  + N   A LGYEDS+ELFS+GRID++WLNRCTTKSSH   NN ++ ++
Sbjct: 117 AQRTPNPCFIGPLVNSPAAALGYEDSRELFSMGRIDSQWLNRCTTKSSH---NNGSKALD 173

Query: 361 IDVESETDLFEIVLDNMKRSP 423
            D +SE DLFEIVLD   RSP
Sbjct: 174 FDEDSEADLFEIVLDRSGRSP 194


>ref|XP_002284938.1| PREDICTED: protein SSH4-like [Vitis vinifera]
          Length = 305

 Score =  210 bits (534), Expect = 1e-52
 Identities = 99/141 (70%), Positives = 115/141 (81%)
 Frame = +1

Query: 1   CGFNPSQKKVFFTIDSELVHVIHCKSDEFGSPLYPTLAANIDITVVVNFGQRPFKYAPAN 180
           CGF+PSQKKVFFTIDSELVHV+HCKS+EFGSPLYPTL AN D+ V+VNFGQ  F YAPAN
Sbjct: 164 CGFDPSQKKVFFTIDSELVHVVHCKSEEFGSPLYPTLGANTDVEVLVNFGQSMFSYAPAN 223

Query: 181 SHRTTNPCFIRSVTNGHTATLGYEDSKELFSIGRIDAEWLNRCTTKSSHSTINNDNRNVE 360
           + RT NPCFI  + N   A LGYEDS+ELFS+GRID++WLNRCTTKSSH   NN ++ ++
Sbjct: 224 AQRTPNPCFIGPLVNSPAAALGYEDSRELFSMGRIDSQWLNRCTTKSSH---NNGSKALD 280

Query: 361 IDVESETDLFEIVLDNMKRSP 423
            D +SE DLFEIVLD   RSP
Sbjct: 281 FDEDSEADLFEIVLDRSGRSP 301


>ref|XP_003589150.1| Protein ssh4 [Medicago truncatula] gi|355478198|gb|AES59401.1|
           Protein ssh4 [Medicago truncatula]
          Length = 446

 Score =  196 bits (498), Expect = 2e-48
 Identities = 92/141 (65%), Positives = 111/141 (78%)
 Frame = +1

Query: 1   CGFNPSQKKVFFTIDSELVHVIHCKSDEFGSPLYPTLAANIDITVVVNFGQRPFKYAPAN 180
           CGF+P QKKVFFT+DSELVHVIHC+S+EF +PL PTLAANIDI V+VNFGQ  FKYAPAN
Sbjct: 300 CGFDPRQKKVFFTLDSELVHVIHCQSEEFSTPLCPTLAANIDIMVLVNFGQIAFKYAPAN 359

Query: 181 SHRTTNPCFIRSVTNGHTATLGYEDSKELFSIGRIDAEWLNRCTTKSSHSTINNDNRNVE 360
           + RT NPCFI  + +   A LG++DSKELFS+GRID+ W NR  TK +H  +NN+N   +
Sbjct: 360 AQRTPNPCFIAPLVHSPGAALGFDDSKELFSMGRIDSPWQNRSATKENHINVNNNNLAFD 419

Query: 361 IDVESETDLFEIVLDNMKRSP 423
            D ESE DLFEIVLD  ++SP
Sbjct: 420 FDEESEADLFEIVLDGSEKSP 440


>ref|XP_002510180.1| conserved hypothetical protein [Ricinus communis]
           gi|223550881|gb|EEF52367.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 480

 Score =  194 bits (493), Expect = 6e-48
 Identities = 97/148 (65%), Positives = 117/148 (79%), Gaps = 7/148 (4%)
 Frame = +1

Query: 1   CGFNPSQKKVFFTIDSELVHVIHCKSDEFGSPLYPTLAANIDITVVVNFGQRPFKYAPAN 180
           CGF+P QKKVFFT+D+ELVHVI+CK++EFGSPLYPT+AAN D+ V+VNFGQ  F YA AN
Sbjct: 331 CGFDPRQKKVFFTVDAELVHVINCKTEEFGSPLYPTIAANNDVLVLVNFGQSAFSYAQAN 390

Query: 181 SHRTTNPCFIRSVTNGHTATLGYEDSKELFSIGRIDAEWLNRCTTKSS-HSTIN------ 339
           + RT NPCFI  + N  +  LGYEDSKELFS+GRID++WLNRCTTK+S HS+ N      
Sbjct: 391 AQRTPNPCFIGPLVN--SPALGYEDSKELFSMGRIDSQWLNRCTTKASLHSSSNHHHNGT 448

Query: 340 NDNRNVEIDVESETDLFEIVLDNMKRSP 423
           ++NR V+ D ESE DLFEIVLD   RSP
Sbjct: 449 SNNRAVDFDEESEADLFEIVLDGTGRSP 476


>ref|XP_003545323.1| PREDICTED: uncharacterized protein LOC100788520 [Glycine max]
          Length = 465

 Score =  188 bits (477), Expect = 5e-46
 Identities = 93/140 (66%), Positives = 109/140 (77%)
 Frame = +1

Query: 1   CGFNPSQKKVFFTIDSELVHVIHCKSDEFGSPLYPTLAANIDITVVVNFGQRPFKYAPAN 180
           CGF+P QKKVFFT+DSELVHVIHC+S+EF +PL PTLAANIDI V+VNFGQ  FKYAPAN
Sbjct: 322 CGFDPRQKKVFFTLDSELVHVIHCQSEEFATPLCPTLAANIDIQVLVNFGQSAFKYAPAN 381

Query: 181 SHRTTNPCFIRSVTNGHTATLGYEDSKELFSIGRIDAEWLNRCTTKSSHSTINNDNRNVE 360
           + RT NPCFI  + N   ATLGY+DSKELFS+GRID++WLNR   K +H    N  + ++
Sbjct: 382 AQRTPNPCFIAPLVNSPGATLGYDDSKELFSMGRIDSQWLNRSANKGNHHN-GNSTQVLD 440

Query: 361 IDVESETDLFEIVLDNMKRS 420
            D ESE DLFEIVLD  K S
Sbjct: 441 FD-ESEADLFEIVLDVSKHS 459


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