BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039140
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|2...   171   4e-41
ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein C...   169   3e-40
ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein C...   165   4e-39
ref|XP_002519098.1| conserved hypothetical protein [Ricinus comm...   163   1e-38
ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein C...   159   3e-37

>ref|XP_002313066.1| predicted protein [Populus trichocarpa] gi|222849474|gb|EEE87021.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score =  171 bits (434), Expect = 4e-41
 Identities = 81/91 (89%), Positives = 86/91 (94%)
 Frame = -2

Query: 273 LQPNGFLSTPTEAFNTEVHVNRFYMDYYDSGEVSQFHTDLSLFDLDGKEVMRKTISVNDP 94
           L P+GFLSTPTEAFNTEVHVNRFYMDYYD G+V QFHTDLSLFDL+GKEVMRKTISVNDP
Sbjct: 181 LGPSGFLSTPTEAFNTEVHVNRFYMDYYDGGDVKQFHTDLSLFDLNGKEVMRKTISVNDP 240

Query: 93  LRYNGITIYQTDWSISALQVLKDNEGPFNLA 1
           LRY GIT+YQTDWSISALQV KD+EGPFNLA
Sbjct: 241 LRYGGITMYQTDWSISALQVRKDDEGPFNLA 271


>ref|XP_002281077.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic
           [Vitis vinifera] gi|297741415|emb|CBI32546.3| unnamed
           protein product [Vitis vinifera]
          Length = 557

 Score =  169 bits (427), Expect = 3e-40
 Identities = 79/91 (86%), Positives = 87/91 (95%)
 Frame = -2

Query: 273 LQPNGFLSTPTEAFNTEVHVNRFYMDYYDSGEVSQFHTDLSLFDLDGKEVMRKTISVNDP 94
           L P+GFLSTPT+AF+TEVHVNRFYMDYYDSGEV QFHTDLSLFDL+GKEVMRKTISVNDP
Sbjct: 306 LSPSGFLSTPTKAFDTEVHVNRFYMDYYDSGEVLQFHTDLSLFDLNGKEVMRKTISVNDP 365

Query: 93  LRYNGITIYQTDWSISALQVLKDNEGPFNLA 1
           LR++GITIYQTDWS SALQ+ KD+EGPFNLA
Sbjct: 366 LRFDGITIYQTDWSFSALQIRKDDEGPFNLA 396


>ref|XP_003537900.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Glycine max]
          Length = 563

 Score =  165 bits (417), Expect = 4e-39
 Identities = 77/91 (84%), Positives = 86/91 (94%)
 Frame = -2

Query: 273 LQPNGFLSTPTEAFNTEVHVNRFYMDYYDSGEVSQFHTDLSLFDLDGKEVMRKTISVNDP 94
           L P GFLS+PT+AFNTE+HVN+F MDYY+SGEVSQFHTDLSL ++DGKEVMRKTISVNDP
Sbjct: 312 LAPFGFLSSPTDAFNTEIHVNKFSMDYYESGEVSQFHTDLSLRNMDGKEVMRKTISVNDP 371

Query: 93  LRYNGITIYQTDWSISALQVLKDNEGPFNLA 1
           LRY GITIYQTDWSISALQ+LKDNEGP+NLA
Sbjct: 372 LRYGGITIYQTDWSISALQILKDNEGPYNLA 402


>ref|XP_002519098.1| conserved hypothetical protein [Ricinus communis]
           gi|223541761|gb|EEF43309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 556

 Score =  163 bits (413), Expect = 1e-38
 Identities = 75/91 (82%), Positives = 86/91 (94%)
 Frame = -2

Query: 273 LQPNGFLSTPTEAFNTEVHVNRFYMDYYDSGEVSQFHTDLSLFDLDGKEVMRKTISVNDP 94
           L P+GFLSTPTEAFNTEVHVN+FYMDYYDSGEVSQF++DLSL+D+DGKEV+RKTISVN+P
Sbjct: 304 LGPSGFLSTPTEAFNTEVHVNKFYMDYYDSGEVSQFYSDLSLYDIDGKEVLRKTISVNNP 363

Query: 93  LRYNGITIYQTDWSISALQVLKDNEGPFNLA 1
           LRY G TIYQTDWS SALQ+ K++EGPFNLA
Sbjct: 364 LRYGGFTIYQTDWSFSALQIRKNDEGPFNLA 394


>ref|XP_004162745.1| PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic-like
           [Cucumis sativus]
          Length = 560

 Score =  159 bits (401), Expect = 3e-37
 Identities = 72/91 (79%), Positives = 84/91 (92%)
 Frame = -2

Query: 273 LQPNGFLSTPTEAFNTEVHVNRFYMDYYDSGEVSQFHTDLSLFDLDGKEVMRKTISVNDP 94
           L P+GFL+ PTEAFNTEVHVN+FYM+YYDSGE+ QF++DLSLFDL+GKEVMRKTISVN+P
Sbjct: 310 LNPSGFLAKPTEAFNTEVHVNKFYMNYYDSGEIKQFYSDLSLFDLNGKEVMRKTISVNNP 369

Query: 93  LRYNGITIYQTDWSISALQVLKDNEGPFNLA 1
           LRY G TIYQTDW  SALQ+LK++EGPFNLA
Sbjct: 370 LRYGGFTIYQTDWGFSALQILKNDEGPFNLA 400