BLASTX nr result

ID: Coptis23_contig00039121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039121
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520054.1| ATP binding protein, putative [Ricinus commu...    73   3e-11
ref|XP_002273880.1| PREDICTED: uncharacterized protein LOC100264...    72   4e-11
ref|XP_004148348.1| PREDICTED: serine/threonine-protein kinase S...    69   3e-10
ref|NP_197183.2| protein kinase family protein [Arabidopsis thal...    68   7e-10
ref|XP_002873795.1| ATP binding protein [Arabidopsis lyrata subs...    67   1e-09

>ref|XP_002520054.1| ATP binding protein, putative [Ricinus communis]
           gi|223540818|gb|EEF42378.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 423

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 40/79 (50%), Positives = 48/79 (60%), Gaps = 9/79 (11%)
 Frame = -2

Query: 212 FSSNNKYKLSKFSI--------CKAQLLTNPDDFVVGRMIGSYGFLNVTSYSTLQGSSDF 57
           FS N K+     S+        CKA L+T PD F VGR+IGSYGF+NVTSYS  Q   D 
Sbjct: 25  FSHNRKFSKPPISVNSPIRTQLCKASLITTPDSFEVGRLIGSYGFMNVTSYSGYQSGIDM 84

Query: 56  E-YSLSSQDMERLRVQDVG 3
           E YSL   +M +L+ QDVG
Sbjct: 85  EYYSLPGGNMGQLKFQDVG 103


>ref|XP_002273880.1| PREDICTED: uncharacterized protein LOC100264883 [Vitis vinifera]
           gi|297737299|emb|CBI26500.3| unnamed protein product
           [Vitis vinifera]
          Length = 413

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/55 (65%), Positives = 42/55 (76%)
 Frame = -2

Query: 167 KAQLLTNPDDFVVGRMIGSYGFLNVTSYSTLQGSSDFEYSLSSQDMERLRVQDVG 3
           +A L+T PD F VGR+IGSYGF+N+TSYS  Q   D EY  SS+DM RLRVQDVG
Sbjct: 41  RASLITTPDSFQVGRLIGSYGFMNITSYSGFQPGLDVEY--SSEDMGRLRVQDVG 93


>ref|XP_004148348.1| PREDICTED: serine/threonine-protein kinase STN7, chloroplastic-like
           [Cucumis sativus]
          Length = 419

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/55 (63%), Positives = 41/55 (74%)
 Frame = -2

Query: 167 KAQLLTNPDDFVVGRMIGSYGFLNVTSYSTLQGSSDFEYSLSSQDMERLRVQDVG 3
           +A L+TN D F VGR+IGSYGF+NVTSYS  Q   D EY  SS D+ +LRVQDVG
Sbjct: 50  RASLITNSDSFEVGRLIGSYGFMNVTSYSGFQSGEDVEY--SSGDLGQLRVQDVG 102


>ref|NP_197183.2| protein kinase family protein [Arabidopsis thaliana]
           gi|26452850|dbj|BAC43504.1| unknown protein [Arabidopsis
           thaliana] gi|29824123|gb|AAP04022.1| unknown protein
           [Arabidopsis thaliana] gi|332004959|gb|AED92342.1|
           protein kinase family protein [Arabidopsis thaliana]
          Length = 418

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/54 (61%), Positives = 42/54 (77%)
 Frame = -2

Query: 164 AQLLTNPDDFVVGRMIGSYGFLNVTSYSTLQGSSDFEYSLSSQDMERLRVQDVG 3
           A L+T+ D F VGR+IGSYGF+NVTSY+ LQ  SDFEY  +S D+ RL+ QD+G
Sbjct: 51  ASLITSADSFEVGRLIGSYGFMNVTSYTGLQSGSDFEY--TSDDIGRLKSQDIG 102


>ref|XP_002873795.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319632|gb|EFH50054.1| ATP binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 418

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 33/54 (61%), Positives = 42/54 (77%)
 Frame = -2

Query: 164 AQLLTNPDDFVVGRMIGSYGFLNVTSYSTLQGSSDFEYSLSSQDMERLRVQDVG 3
           A L+T+ D F VGR+IGSYGF+NVTSY+ LQ  SDFEY  +S D+ RL+ QD+G
Sbjct: 51  AGLITSADSFEVGRLIGSYGFMNVTSYTGLQSGSDFEY--TSDDIGRLKSQDIG 102


Top