BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039105
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACK44480.1| hypothetical protein 2 [Triticum aestivum]              70   1e-10
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    62   1e-10
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    68   7e-10
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...    68   9e-10
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    66   3e-09

>gb|ACK44480.1| hypothetical protein 2 [Triticum aestivum]
          Length = 372

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/64 (50%), Positives = 41/64 (64%)
 Frame = +2

Query: 95  QAGKLTLIKVVTSAMPSYIMSIFSLPISTCDKLDSLNANFFWGKTKENTHKIHYICWNKI 274
           QAGK TLIK V  A+P+YIM +F LP+S CD L  +  N++WG  K    K H++ W KI
Sbjct: 3   QAGKETLIKAVAHAIPAYIMGVFKLPLSVCDDLTRMVRNYWWGSEK-GKRKAHWMAWEKI 61

Query: 275 CHPK 286
             PK
Sbjct: 62  IQPK 65


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 61.6 bits (148), Expect(2) = 1e-10
 Identities = 30/63 (47%), Positives = 39/63 (61%)
 Frame = +2

Query: 98  AGKLTLIKVVTSAMPSYIMSIFSLPISTCDKLDSLNANFFWGKTKENTHKIHYICWNKIC 277
           AG+LTL K V S+MP + MS   LP S  ++LD L+  F WG T E   K H + W+K+C
Sbjct: 35  AGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLWGSTAEK-KKQHLVKWSKVC 93

Query: 278 HPK 286
            PK
Sbjct: 94  SPK 96



 Score = 28.9 bits (63), Expect(2) = 1e-10
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 1   LILSRKSRIDFDEVLQMVLQRMEGWGAKLLSPSGK 105
           ++  R ++  F E+L+ V  RM GW  K LS +G+
Sbjct: 3   VLQKRINKDTFGEILERVSSRMSGWREKTLSFAGR 37


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/74 (45%), Positives = 44/74 (59%)
 Frame = +2

Query: 65  WKGGELNSYPQAGKLTLIKVVTSAMPSYIMSIFSLPISTCDKLDSLNANFFWGKTKENTH 244
           WKG  L+    AG++TL K V S++P ++MS   LP+ST D LD  +  F WG T E   
Sbjct: 642 WKGRSLSL---AGRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEK-K 697

Query: 245 KIHYICWNKICHPK 286
           K H + W KIC PK
Sbjct: 698 KQHLLSWRKICKPK 711


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/72 (44%), Positives = 45/72 (62%)
 Frame = +2

Query: 71  GGELNSYPQAGKLTLIKVVTSAMPSYIMSIFSLPISTCDKLDSLNANFFWGKTKENTHKI 250
           G +  S   AG+  LIK V  A+P+YIMS F LP   C +++S+  NF+WG+ KE T KI
Sbjct: 27  GWKEKSLSVAGREVLIKSVAQAIPTYIMSCFRLPDGVCXEIESMVCNFWWGQ-KEETRKI 85

Query: 251 HYICWNKICHPK 286
           H+  W ++C  K
Sbjct: 86  HWTSWKQLCKSK 97


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 34/90 (37%), Positives = 53/90 (58%)
 Frame = +2

Query: 17   KVELILMKSYKWFFREWKGGELNSYPQAGKLTLIKVVTSAMPSYIMSIFSLPISTCDKLD 196
            KV    +K   W  ++ +G +     + GK  LIK V  A+P+Y+MS+FSLP    D++ 
Sbjct: 765  KVTFACIKERIW--KKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSVFSLPSGLIDEIH 822

Query: 197  SLNANFFWGKTKENTHKIHYICWNKICHPK 286
            SL A F+WG +  N  K+H+  W+ +C+PK
Sbjct: 823  SLLARFWWGSSDTN-RKMHWHSWDTLCYPK 851