BLASTX nr result

ID: Coptis23_contig00039091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039091
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334118.1| predicted protein [Populus trichocarpa] gi|2...   132   4e-29
ref|XP_002338788.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002336687.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_002333722.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_003600098.1| Zinc finger MYM-type protein [Medicago trunc...   116   2e-24

>ref|XP_002334118.1| predicted protein [Populus trichocarpa] gi|222869621|gb|EEF06752.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/88 (73%), Positives = 76/88 (86%)
 Frame = +1

Query: 16  FHNMSTMSKLCRRLVETGKSKSYHLIDRLVRLVLTLPISTATTERAFSAMKLIKTQLRNK 195
           F NMST+S+LCR L ET KS+ YHLIDRL+RLVLTLP+STATTERAFSAMK +KT LRNK
Sbjct: 21  FQNMSTISELCRGLAETNKSQHYHLIDRLIRLVLTLPVSTATTERAFSAMKHVKTVLRNK 80

Query: 196 MEDEFLANSMVIYIERDFANDIDLDLVI 279
           ME+EFLA+SM+IYIER+   DID D +I
Sbjct: 81  MEEEFLADSMMIYIERELVEDIDSDSII 108


>ref|XP_002338788.1| predicted protein [Populus trichocarpa] gi|222873463|gb|EEF10594.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/86 (62%), Positives = 74/86 (86%)
 Frame = +1

Query: 22  NMSTMSKLCRRLVETGKSKSYHLIDRLVRLVLTLPISTATTERAFSAMKLIKTQLRNKME 201
           NMS+++ LC+ LVET KS  Y LIDRL+RL+LTLP+STATTERAFSAMK++KT+LRN+ME
Sbjct: 111 NMSSIADLCQGLVETEKSTIYPLIDRLIRLILTLPVSTATTERAFSAMKIVKTRLRNRME 170

Query: 202 DEFLANSMVIYIERDFANDIDLDLVI 279
           D+FLAN +++YIE++ A    +D++I
Sbjct: 171 DDFLANYLIVYIEKEIAERFPIDMII 196


>ref|XP_002336687.1| predicted protein [Populus trichocarpa] gi|222836527|gb|EEE74934.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/86 (62%), Positives = 74/86 (86%)
 Frame = +1

Query: 22  NMSTMSKLCRRLVETGKSKSYHLIDRLVRLVLTLPISTATTERAFSAMKLIKTQLRNKME 201
           NMS+++ LC+ LVET KS  Y LIDRL+RL+LTLP+STATTERAFSAMK++KT+LRN+ME
Sbjct: 397 NMSSIADLCQGLVETEKSTIYPLIDRLIRLILTLPVSTATTERAFSAMKIVKTRLRNRME 456

Query: 202 DEFLANSMVIYIERDFANDIDLDLVI 279
           D+FLAN +++YIE++ A    +D++I
Sbjct: 457 DDFLANYLIVYIEKEIAERFPIDMII 482


>ref|XP_002333722.1| predicted protein [Populus trichocarpa] gi|222838364|gb|EEE76729.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/86 (62%), Positives = 73/86 (84%)
 Frame = +1

Query: 22  NMSTMSKLCRRLVETGKSKSYHLIDRLVRLVLTLPISTATTERAFSAMKLIKTQLRNKME 201
           NMS++S LC+ LVET KS  Y LIDRL+RL+LTLP+STATTER FSAMK++KT+LRN+ME
Sbjct: 218 NMSSISDLCQGLVETEKSTIYPLIDRLIRLILTLPVSTATTERVFSAMKIVKTRLRNRME 277

Query: 202 DEFLANSMVIYIERDFANDIDLDLVI 279
           D+FLAN +++YIE++ A    +D++I
Sbjct: 278 DDFLANYLIVYIEKEIAERFTIDMII 303


>ref|XP_003600098.1| Zinc finger MYM-type protein [Medicago truncatula]
           gi|355489146|gb|AES70349.1| Zinc finger MYM-type protein
           [Medicago truncatula]
          Length = 795

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/87 (62%), Positives = 74/87 (85%)
 Frame = +1

Query: 19  HNMSTMSKLCRRLVETGKSKSYHLIDRLVRLVLTLPISTATTERAFSAMKLIKTQLRNKM 198
           + +STMS+LC  L  TGK+ +++L+DRL+RL+LTLP+STATTER+FS MKLIKT+LRNKM
Sbjct: 696 NKLSTMSELCEALNTTGKADTHYLVDRLIRLILTLPVSTATTERSFSTMKLIKTRLRNKM 755

Query: 199 EDEFLANSMVIYIERDFANDIDLDLVI 279
           EDEFLA+SM++YIE++ A+    D +I
Sbjct: 756 EDEFLADSMMLYIEKEIADQFSTDSII 782


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