BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039079
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-...   132   4e-29
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-...   132   4e-29
ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...   129   2e-28
ref|NP_001141474.1| uncharacterized protein LOC100273584 [Zea ma...   128   4e-28
ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [S...   128   5e-28

>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 560

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/91 (71%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
 Frame = -1

Query: 395 YVSVFNEQAEKIIGCSADELDKMKKD-GDETSYLLKLKEATWAPHVFCVVVTQADYNNEK 219
           +VS FNE+AE+I+GCSADELD++K   G+E SY LKLKEATW PH+F V V+Q +YNNEK
Sbjct: 470 WVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEK 529

Query: 218 RQRITVRDLAPVDFVAESRFLLEEISKMQDS 126
           RQRITVR +APVDF AESRFLLEEI+KM+ S
Sbjct: 530 RQRITVRSVAPVDFAAESRFLLEEIAKMKAS 560


>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 603

 Score =  132 bits (331), Expect = 4e-29
 Identities = 65/91 (71%), Positives = 78/91 (85%), Gaps = 1/91 (1%)
 Frame = -1

Query: 395 YVSVFNEQAEKIIGCSADELDKMKKD-GDETSYLLKLKEATWAPHVFCVVVTQADYNNEK 219
           +VS FNE+AE+I+GCSADELD++K   G+E SY LKLKEATW PH+F V V+Q +YNNEK
Sbjct: 513 WVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEK 572

Query: 218 RQRITVRDLAPVDFVAESRFLLEEISKMQDS 126
           RQRITVR +APVDF AESRFLLEEI+KM+ S
Sbjct: 573 RQRITVRSVAPVDFAAESRFLLEEIAKMKAS 603


>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546255|gb|EEF47757.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 622

 Score =  129 bits (324), Expect = 2e-28
 Identities = 63/90 (70%), Positives = 74/90 (82%)
 Frame = -1

Query: 395 YVSVFNEQAEKIIGCSADELDKMKKDGDETSYLLKLKEATWAPHVFCVVVTQADYNNEKR 216
           +VS FN + E+IIGCSADELDK+K   D  SY LKLKEATW+PH+F V V Q +YNNEKR
Sbjct: 532 WVSAFNNEGERIIGCSADELDKLKSQEDGNSYELKLKEATWSPHLFRVSVAQNEYNNEKR 591

Query: 215 QRITVRDLAPVDFVAESRFLLEEISKMQDS 126
           QRITVR +AP+DF AESRFLLEEISK++ S
Sbjct: 592 QRITVRAVAPLDFAAESRFLLEEISKIKGS 621


>ref|NP_001141474.1| uncharacterized protein LOC100273584 [Zea mays]
           gi|194704722|gb|ACF86445.1| unknown [Zea mays]
           gi|195647462|gb|ACG43199.1| replication protein A 70 kDa
           DNA-binding subunit [Zea mays]
           gi|413956552|gb|AFW89201.1| Replication protein A
           DNA-binding subunit [Zea mays]
          Length = 623

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/87 (71%), Positives = 75/87 (86%)
 Frame = -1

Query: 395 YVSVFNEQAEKIIGCSADELDKMKKDGDETSYLLKLKEATWAPHVFCVVVTQADYNNEKR 216
           +VSVFNE AEKIIGCSADELD+++K+  + SY+LKLKEATW PH+F V VTQ +Y NEKR
Sbjct: 534 WVSVFNEHAEKIIGCSADELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKR 593

Query: 215 QRITVRDLAPVDFVAESRFLLEEISKM 135
           QRITVR  APVDF AES++LLEEI+K+
Sbjct: 594 QRITVRGEAPVDFAAESKYLLEEIAKL 620


>ref|XP_002468278.1| hypothetical protein SORBIDRAFT_01g042890 [Sorghum bicolor]
           gi|241922132|gb|EER95276.1| hypothetical protein
           SORBIDRAFT_01g042890 [Sorghum bicolor]
          Length = 623

 Score =  128 bits (321), Expect = 5e-28
 Identities = 61/87 (70%), Positives = 75/87 (86%)
 Frame = -1

Query: 395 YVSVFNEQAEKIIGCSADELDKMKKDGDETSYLLKLKEATWAPHVFCVVVTQADYNNEKR 216
           +VSVFNE AEKIIGCSADELD+++K+  + SY+LKLKEATW PH+F V VTQ +Y NEKR
Sbjct: 534 WVSVFNEHAEKIIGCSADELDRIRKEEGDDSYILKLKEATWVPHLFRVSVTQHEYMNEKR 593

Query: 215 QRITVRDLAPVDFVAESRFLLEEISKM 135
           QRITVR  APVD+ AES++LLEEI+K+
Sbjct: 594 QRITVRSEAPVDYAAESKYLLEEIAKL 620