BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039066
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   142   4e-32
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   142   4e-32
ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   142   4e-32
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...   140   8e-32
ref|XP_002464527.1| hypothetical protein SORBIDRAFT_01g020130 [S...   126   2e-27

>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1427

 Score =  142 bits (357), Expect = 4e-32
 Identities = 73/125 (58%), Positives = 87/125 (69%), Gaps = 4/125 (3%)
 Frame = +2

Query: 5   DVVVDVIGHGLKRINELFPSFMAMQYPLLFPYAEDGYMLGIPYR----KGSNVKKRKHVS 172
           D+V++    GL+RI E  P FMAMQYPLLFPYAEDG+ L I Y     K    KKRK V+
Sbjct: 230 DIVIEHKTDGLQRIKEYHPKFMAMQYPLLFPYAEDGFHLDIYYSQNHAKRKKKKKRKKVT 289

Query: 173 MREYYAYRIQQRANEGHTIICGRRLMLQYLVDGYAATEENRLNWVRQNQDKIRSDLYKGL 352
           MREYYAYRIQQR  E +T+I G RL  QY+VD + A EE RL WVRQNQ  +R+DLY+ +
Sbjct: 290 MREYYAYRIQQRPCEANTLIIGGRLFQQYVVDAFTAIEEERLRWVRQNQTVLRTDLYRNV 349

Query: 353 VDTVV 367
            D VV
Sbjct: 350 CDAVV 354


>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score =  142 bits (357), Expect = 4e-32
 Identities = 73/125 (58%), Positives = 87/125 (69%), Gaps = 4/125 (3%)
 Frame = +2

Query: 5   DVVVDVIGHGLKRINELFPSFMAMQYPLLFPYAEDGYMLGIPYR----KGSNVKKRKHVS 172
           D+V++    GL+RI E  P FMAMQYPLLFPYAEDG+ L I Y     K    KKRK V+
Sbjct: 230 DIVIEHKTDGLQRIKEYHPKFMAMQYPLLFPYAEDGFHLDIYYSQNHAKRKKKKKRKKVT 289

Query: 173 MREYYAYRIQQRANEGHTIICGRRLMLQYLVDGYAATEENRLNWVRQNQDKIRSDLYKGL 352
           MREYYAYRIQQR  E +T+I G RL  QY+VD + A EE RL WVRQNQ  +R+DLY+ +
Sbjct: 290 MREYYAYRIQQRPCEANTLIIGGRLFQQYVVDAFTAIEEERLRWVRQNQTVLRTDLYRNV 349

Query: 353 VDTVV 367
            D VV
Sbjct: 350 CDAVV 354


>ref|XP_003609074.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510129|gb|AES91271.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1531

 Score =  142 bits (357), Expect = 4e-32
 Identities = 73/125 (58%), Positives = 87/125 (69%), Gaps = 4/125 (3%)
 Frame = +2

Query: 5   DVVVDVIGHGLKRINELFPSFMAMQYPLLFPYAEDGYMLGIPYR----KGSNVKKRKHVS 172
           D+V++    GL+RI E  P FMAMQYPLLFPYAEDG+ L I Y     K    KKRK V+
Sbjct: 203 DIVIEHKTDGLQRIKEYHPKFMAMQYPLLFPYAEDGFHLDIYYSQNHAKRKKKKKRKKVT 262

Query: 173 MREYYAYRIQQRANEGHTIICGRRLMLQYLVDGYAATEENRLNWVRQNQDKIRSDLYKGL 352
           MREYYAYRIQQR  E +T+I G RL  QY+VD + A EE RL WVRQNQ  +R+DLY+ +
Sbjct: 263 MREYYAYRIQQRPCEANTLIIGGRLFQQYVVDAFTAIEEERLRWVRQNQTVLRTDLYRNV 322

Query: 353 VDTVV 367
            D VV
Sbjct: 323 CDAVV 327


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score =  140 bits (354), Expect = 8e-32
 Identities = 72/125 (57%), Positives = 87/125 (69%), Gaps = 4/125 (3%)
 Frame = +2

Query: 5   DVVVDVIGHGLKRINELFPSFMAMQYPLLFPYAEDGYMLGIPYR----KGSNVKKRKHVS 172
           D+V++    GL+RI E  P FMAMQYPLLFPYAEDG+ L I Y     K    KKRK V+
Sbjct: 230 DIVIEHKTDGLQRIKEYHPKFMAMQYPLLFPYAEDGFHLDIYYSQNHAKRKKKKKRKKVT 289

Query: 173 MREYYAYRIQQRANEGHTIICGRRLMLQYLVDGYAATEENRLNWVRQNQDKIRSDLYKGL 352
           +REYYAYRIQQR  E +T+I G RL  QY+VD + A EE RL WVRQNQ  +R+DLY+ +
Sbjct: 290 LREYYAYRIQQRPCEANTLIIGGRLFQQYVVDAFTAIEEERLRWVRQNQTVLRTDLYRNV 349

Query: 353 VDTVV 367
            D VV
Sbjct: 350 CDAVV 354


>ref|XP_002464527.1| hypothetical protein SORBIDRAFT_01g020130 [Sorghum bicolor]
           gi|241918381|gb|EER91525.1| hypothetical protein
           SORBIDRAFT_01g020130 [Sorghum bicolor]
          Length = 1318

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/121 (48%), Positives = 85/121 (70%)
 Frame = +2

Query: 5   DVVVDVIGHGLKRINELFPSFMAMQYPLLFPYAEDGYMLGIPYRKGSNVKKRKHVSMREY 184
           D+V++      KRI EL P FMAMQYPLLFPY EDG+  GI YR       +K+++MREY
Sbjct: 212 DIVLEYKDMRPKRIPELHPKFMAMQYPLLFPYGEDGFRPGIRYRANGARNGKKYITMREY 271

Query: 185 YAYRIQQRANEGHTIICGRRLMLQYLVDGYAATEENRLNWVRQNQDKIRSDLYKGLVDTV 364
           YAYR+QQR+++   ++    L +Q+LVD YA  E++RL+W+R+NQ  +R++L+ GL D +
Sbjct: 272 YAYRLQQRSDQSMLMLMCGNLSMQFLVDVYACIEQSRLDWIRKNQGALRTELFSGLRDAI 331

Query: 365 V 367
           V
Sbjct: 332 V 332