BLASTX nr result

ID: Coptis23_contig00039059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039059
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264951.2| PREDICTED: putative potassium transporter 12...   115   5e-24
emb|CBI32128.3| unnamed protein product [Vitis vinifera]              115   5e-24
emb|CAN75896.1| hypothetical protein VITISV_038659 [Vitis vinifera]   115   5e-24
ref|XP_002462306.1| hypothetical protein SORBIDRAFT_02g023620 [S...   114   1e-23
tpg|DAA61261.1| TPA: hypothetical protein ZEAMMB73_872077 [Zea m...   112   2e-23

>ref|XP_002264951.2| PREDICTED: putative potassium transporter 12-like [Vitis vinifera]
          Length = 829

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/92 (63%), Positives = 64/92 (69%), Gaps = 6/92 (6%)
 Frame = -1

Query: 258 YFAKQNFMFKTV**ISKLFFPWCKGGLFWPVFAIATLAAMI------SATFSCIKQSMAL 97
           Y  +  F+ K      ++F+     GLFWPVF IATLAAMI      SATFSCIKQSMAL
Sbjct: 377 YMGQAAFLMKHPHSTGRIFYDCVPDGLFWPVFVIATLAAMIASQAMISATFSCIKQSMAL 436

Query: 96  SCFPRLKIVHTSSSFMGQIYIPAINWFLMIMC 1
            CFPRLKI+HTS   MGQIYIP INWFLMIMC
Sbjct: 437 GCFPRLKIIHTSRKLMGQIYIPVINWFLMIMC 468


>emb|CBI32128.3| unnamed protein product [Vitis vinifera]
          Length = 731

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/92 (63%), Positives = 64/92 (69%), Gaps = 6/92 (6%)
 Frame = -1

Query: 258 YFAKQNFMFKTV**ISKLFFPWCKGGLFWPVFAIATLAAMI------SATFSCIKQSMAL 97
           Y  +  F+ K      ++F+     GLFWPVF IATLAAMI      SATFSCIKQSMAL
Sbjct: 308 YMGQAAFLMKHPHSTGRIFYDCVPDGLFWPVFVIATLAAMIASQAMISATFSCIKQSMAL 367

Query: 96  SCFPRLKIVHTSSSFMGQIYIPAINWFLMIMC 1
            CFPRLKI+HTS   MGQIYIP INWFLMIMC
Sbjct: 368 GCFPRLKIIHTSRKLMGQIYIPVINWFLMIMC 399


>emb|CAN75896.1| hypothetical protein VITISV_038659 [Vitis vinifera]
          Length = 889

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/92 (63%), Positives = 64/92 (69%), Gaps = 6/92 (6%)
 Frame = -1

Query: 258 YFAKQNFMFKTV**ISKLFFPWCKGGLFWPVFAIATLAAMI------SATFSCIKQSMAL 97
           Y  +  F+ K      ++F+     GLFWPVF IATLAAMI      SATFSCIKQSMAL
Sbjct: 432 YMGQAAFLMKHPHSTGRIFYDCVPDGLFWPVFVIATLAAMIASQAMISATFSCIKQSMAL 491

Query: 96  SCFPRLKIVHTSSSFMGQIYIPAINWFLMIMC 1
            CFPRLKI+HTS   MGQIYIP INWFLMIMC
Sbjct: 492 GCFPRLKIIHTSRKLMGQIYIPVINWFLMIMC 523


>ref|XP_002462306.1| hypothetical protein SORBIDRAFT_02g023620 [Sorghum bicolor]
           gi|241925683|gb|EER98827.1| hypothetical protein
           SORBIDRAFT_02g023620 [Sorghum bicolor]
          Length = 852

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/92 (58%), Positives = 65/92 (70%), Gaps = 6/92 (6%)
 Frame = -1

Query: 258 YFAKQNFMFKTV**ISKLFFPWCKGGLFWPVFAIATLAAMI------SATFSCIKQSMAL 97
           Y  +  F+ K    + ++F+    G LFWPVF IATLAAMI      SATFSCIKQ+MAL
Sbjct: 395 YMGQAAFLMKNPLAVERIFYDSVPGALFWPVFVIATLAAMIASQAMISATFSCIKQAMAL 454

Query: 96  SCFPRLKIVHTSSSFMGQIYIPAINWFLMIMC 1
            CFPR+KI+HTS   MGQIYIP +NWFLM+MC
Sbjct: 455 GCFPRIKIIHTSKKVMGQIYIPVMNWFLMVMC 486


>tpg|DAA61261.1| TPA: hypothetical protein ZEAMMB73_872077 [Zea mays]
          Length = 852

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/92 (58%), Positives = 65/92 (70%), Gaps = 6/92 (6%)
 Frame = -1

Query: 258 YFAKQNFMFKTV**ISKLFFPWCKGGLFWPVFAIATLAAMI------SATFSCIKQSMAL 97
           Y  +  F+ K    + ++F+    G LFWPVF IATLAAMI      SATFSCIKQ+MAL
Sbjct: 395 YMGQAAFLMKNPLVVERIFYDSVPGVLFWPVFVIATLAAMIASQAMISATFSCIKQAMAL 454

Query: 96  SCFPRLKIVHTSSSFMGQIYIPAINWFLMIMC 1
            CFPR+KI+HTS   MGQIYIP +NWFLM+MC
Sbjct: 455 GCFPRIKIIHTSKKVMGQIYIPVMNWFLMVMC 486


Top