BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039047
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325053.1| predicted protein [Populus trichocarpa] gi|2...    97   3e-26
ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containi...   100   4e-26
emb|CBI32034.3| unnamed protein product [Vitis vinifera]              100   4e-26
ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-24
ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago ...    91   9e-24

>ref|XP_002325053.1| predicted protein [Populus trichocarpa] gi|222866487|gb|EEF03618.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score = 96.7 bits (239), Expect(2) = 3e-26
 Identities = 54/100 (54%), Positives = 69/100 (69%), Gaps = 3/100 (3%)
 Frame = -3

Query: 379 DVKVNKSGLHSECSNN---ELSEEVAKRILQSDGGASSGVYVLLSRVYASANC*NDVGMV 209
           DV + +S L S C  N   ELSE +A++IL+S+   SSGVYVLLSRVYASA+  NDVG+V
Sbjct: 400 DVVIWRSLLDSCCKKNASVELSENIARQILESEEADSSGVYVLLSRVYASASRWNDVGLV 459

Query: 208 QRLMSEKDITKEPGCSLIEVDGQVRQFLQGTLHIVQQRDI 89
           ++LM+   I KEPGCSLIEVDG   +F  G     Q ++I
Sbjct: 460 RKLMTNNGILKEPGCSLIEVDGVTHEFFAGDTSHPQTKEI 499



 Score = 46.6 bits (109), Expect(2) = 3e-26
 Identities = 21/32 (65%), Positives = 26/32 (81%)
 Frame = -1

Query: 102 SKEIYRSLRDVEDRLESAGYVPDLSQAPMVDE 7
           +KEIY+ L  VE+R++S GY PD SQAPMVDE
Sbjct: 496 TKEIYQVLNVVEERIDSTGYKPDYSQAPMVDE 527


>ref|XP_002269101.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Vitis vinifera]
          Length = 607

 Score =  100 bits (248), Expect(2) = 4e-26
 Identities = 52/100 (52%), Positives = 71/100 (71%), Gaps = 3/100 (3%)
 Frame = -3

Query: 379 DVKVNKSGLHSECSNN---ELSEEVAKRILQSDGGASSGVYVLLSRVYASANC*NDVGMV 209
           D+ + +S L + C  N   ELSEE+A+R+L+++GG  SGVYVLLSRVYASA+  NDVGMV
Sbjct: 400 DLVIWRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMV 459

Query: 208 QRLMSEKDITKEPGCSLIEVDGQVRQFLQGTLHIVQQRDI 89
           ++LM++K + KEPGCS IE+DG   +F  G     Q  +I
Sbjct: 460 RKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQTEEI 499



 Score = 42.7 bits (99), Expect(2) = 4e-26
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = -1

Query: 102 SKEIYRSLRDVEDRLESAGYVPDLSQAPMVDE 7
           ++EIY +L  +E+R+E  GY PD SQAPMVDE
Sbjct: 496 TEEIYSALDVIEERVERVGYSPDSSQAPMVDE 527


>emb|CBI32034.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  100 bits (248), Expect(2) = 4e-26
 Identities = 52/100 (52%), Positives = 71/100 (71%), Gaps = 3/100 (3%)
 Frame = -3

Query: 379 DVKVNKSGLHSECSNN---ELSEEVAKRILQSDGGASSGVYVLLSRVYASANC*NDVGMV 209
           D+ + +S L + C  N   ELSEE+A+R+L+++GG  SGVYVLLSRVYASA+  NDVGMV
Sbjct: 386 DLVIWRSLLDACCKQNAGVELSEEMARRVLEAEGGVCSGVYVLLSRVYASASRWNDVGMV 445

Query: 208 QRLMSEKDITKEPGCSLIEVDGQVRQFLQGTLHIVQQRDI 89
           ++LM++K + KEPGCS IE+DG   +F  G     Q  +I
Sbjct: 446 RKLMTDKGVVKEPGCSSIEIDGVAHEFFAGDTSHPQTEEI 485



 Score = 42.7 bits (99), Expect(2) = 4e-26
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = -1

Query: 102 SKEIYRSLRDVEDRLESAGYVPDLSQAPMVDE 7
           ++EIY +L  +E+R+E  GY PD SQAPMVDE
Sbjct: 482 TEEIYSALDVIEERVERVGYSPDSSQAPMVDE 513


>ref|XP_003530675.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Glycine max]
          Length = 611

 Score = 94.0 bits (232), Expect(2) = 2e-24
 Identities = 49/87 (56%), Positives = 66/87 (75%), Gaps = 2/87 (2%)
 Frame = -3

Query: 331 ELSEEVAKRILQSDGGA-SSGVYVLLSRVYASANC*NDVGMVQRLMSEKDITKEPGCSLI 155
           ELSEE+AK++ +S+G   SSGVYVLLS+VYASA   NDVG++++LMSEK +TKEPGCS+I
Sbjct: 422 ELSEEMAKQVFESEGSVCSSGVYVLLSKVYASACRWNDVGLLRKLMSEKGVTKEPGCSII 481

Query: 154 EVDGQVRQFLQG-TLHIVQQRDISLIT 77
           E+DG V +F  G T H   +    ++T
Sbjct: 482 EIDGVVHEFFAGDTTHPKSENIYKVVT 508



 Score = 43.5 bits (101), Expect(2) = 2e-24
 Identities = 18/32 (56%), Positives = 26/32 (81%)
 Frame = -1

Query: 102 SKEIYRSLRDVEDRLESAGYVPDLSQAPMVDE 7
           S+ IY+ + ++E++LES GY+PD S APMVDE
Sbjct: 500 SENIYKVVTEIEEKLESIGYLPDYSGAPMVDE 531


>ref|XP_003614059.1| hypothetical protein MTR_5g044260 [Medicago truncatula]
           gi|355515394|gb|AES97017.1| hypothetical protein
           MTR_5g044260 [Medicago truncatula]
          Length = 565

 Score = 90.9 bits (224), Expect(2) = 9e-24
 Identities = 42/81 (51%), Positives = 62/81 (76%)
 Frame = -3

Query: 331 ELSEEVAKRILQSDGGASSGVYVLLSRVYASANC*NDVGMVQRLMSEKDITKEPGCSLIE 152
           ELSEE+AK+I +S+G    G YVLLS+VYASA+  NDVG++++LM++K ++K+PGCSLIE
Sbjct: 377 ELSEEMAKQIFESNGSVCGGAYVLLSKVYASASRWNDVGLLRKLMNDKGVSKKPGCSLIE 436

Query: 151 VDGQVRQFLQGTLHIVQQRDI 89
           ++G   +F  G  +  Q +DI
Sbjct: 437 INGAAHEFFAGDTNHPQSKDI 457



 Score = 44.3 bits (103), Expect(2) = 9e-24
 Identities = 16/32 (50%), Positives = 27/32 (84%)
 Frame = -1

Query: 102 SKEIYRSLRDVEDRLESAGYVPDLSQAPMVDE 7
           SK+IY+ + +++++LES GY+PD S AP++DE
Sbjct: 454 SKDIYKFMNEIQEKLESVGYLPDYSGAPLIDE 485