BLASTX nr result

ID: Coptis23_contig00039033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039033
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283596.2| PREDICTED: probable leucine-rich repeat rece...    97   1e-18
ref|XP_003634703.1| PREDICTED: probable leucine-rich repeat rece...    97   1e-18
emb|CBI20124.3| unnamed protein product [Vitis vinifera]               97   1e-18
emb|CBI20121.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002283578.2| PREDICTED: probable leucine-rich repeat rece...    97   2e-18

>ref|XP_002283596.2| PREDICTED: probable leucine-rich repeat receptor-like
           serine/threonine-protein kinase At3g14840-like [Vitis
           vinifera]
          Length = 1007

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/74 (63%), Positives = 56/74 (75%)
 Frame = +2

Query: 32  VFPCLKSFQCPKKNSSSFHINSGGSEVVSDGSTTFEDDIDSGGASKFFLSRYNWAFSSTG 211
           +  CL+SF CPKK   S HIN GG EV+ DG+TT+EDD DSGG SKF+ SR NWAFSSTG
Sbjct: 384 IVSCLRSFNCPKK-FYSMHINCGGKEVIVDGNTTYEDDTDSGGPSKFYQSRTNWAFSSTG 442

Query: 212 NFMDNNDNDADSYI 253
           +FMD +D   DS+I
Sbjct: 443 HFMD-DDRPTDSFI 455


>ref|XP_003634703.1| PREDICTED: probable leucine-rich repeat receptor-like
           serine/threonine-protein kinase At3g14840-like [Vitis
           vinifera]
          Length = 1007

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/74 (63%), Positives = 56/74 (75%)
 Frame = +2

Query: 32  VFPCLKSFQCPKKNSSSFHINSGGSEVVSDGSTTFEDDIDSGGASKFFLSRYNWAFSSTG 211
           +  CL+SF CPKK   S HIN GG EV+ DG+TT+EDD DSGG SKF+ SR NWAFSSTG
Sbjct: 384 IVSCLRSFNCPKK-FYSMHINCGGKEVIVDGNTTYEDDTDSGGPSKFYQSRTNWAFSSTG 442

Query: 212 NFMDNNDNDADSYI 253
           +FMD +D   DS+I
Sbjct: 443 HFMD-DDRPTDSFI 455


>emb|CBI20124.3| unnamed protein product [Vitis vinifera]
          Length = 1036

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/74 (63%), Positives = 56/74 (75%)
 Frame = +2

Query: 32  VFPCLKSFQCPKKNSSSFHINSGGSEVVSDGSTTFEDDIDSGGASKFFLSRYNWAFSSTG 211
           +  CL+SF CPKK   S HIN GG EV+ DG+TT+EDD DSGG SKF+ SR NWAFSSTG
Sbjct: 413 IVSCLRSFNCPKK-FYSMHINCGGKEVIVDGNTTYEDDTDSGGPSKFYQSRTNWAFSSTG 471

Query: 212 NFMDNNDNDADSYI 253
           +FMD +D   DS+I
Sbjct: 472 HFMD-DDRPTDSFI 484


>emb|CBI20121.3| unnamed protein product [Vitis vinifera]
          Length = 869

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/74 (63%), Positives = 56/74 (75%)
 Frame = +2

Query: 32  VFPCLKSFQCPKKNSSSFHINSGGSEVVSDGSTTFEDDIDSGGASKFFLSRYNWAFSSTG 211
           +  CL+SF CPKK   S HIN GG EV+ DG+TT+EDD DSGG SKF+ SR NWAFSSTG
Sbjct: 384 IVSCLRSFNCPKK-FYSMHINCGGKEVIVDGNTTYEDDTDSGGPSKFYQSRTNWAFSSTG 442

Query: 212 NFMDNNDNDADSYI 253
           +FMD +D   DS+I
Sbjct: 443 HFMD-DDRPTDSFI 455


>ref|XP_002283578.2| PREDICTED: probable leucine-rich repeat receptor-like
           serine/threonine-protein kinase At3g14840-like [Vitis
           vinifera]
          Length = 1011

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/74 (63%), Positives = 57/74 (77%)
 Frame = +2

Query: 32  VFPCLKSFQCPKKNSSSFHINSGGSEVVSDGSTTFEDDIDSGGASKFFLSRYNWAFSSTG 211
           +  CL+SF CPKK   S HIN GG EV+ DG+TT+EDD DSGG SKF+ SR NWAFSSTG
Sbjct: 384 IVSCLRSFNCPKK-FYSMHINCGGKEVIVDGNTTYEDDKDSGGPSKFYQSRTNWAFSSTG 442

Query: 212 NFMDNNDNDADSYI 253
           +FMD +D+  DS+I
Sbjct: 443 HFMD-DDHPTDSFI 455


Top