BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039030
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vi...    59   3e-07
ref|XP_002467649.1| hypothetical protein SORBIDRAFT_01g031620 [S...    57   1e-06
ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
gb|ABK92768.1| unknown [Populus trichocarpa]                           57   1e-06
emb|CBI39148.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_002263903.1| PREDICTED: F-box protein At5g49610 [Vitis vinifera]
           gi|296088512|emb|CBI37503.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 37/99 (37%), Positives = 52/99 (52%)
 Frame = -3

Query: 299 DDIAIEILSRLPIESIYDFKCVSKRWCELFSHPSFISAHFQRSARTVSGIFVQGLHYCAC 120
           DDI +++LSRLP +++   KCV KRW  + S  SFI    QR    ++G F Q   Y  C
Sbjct: 4   DDICMDVLSRLPTKTLLGLKCVCKRWRRIISDRSFIQDLLQR-PEPLAGFFFQE-RYQWC 61

Query: 119 ENYIDSKVVEYISTGKKGRHATSKNILGFLPEKVVVITS 3
           +   D   + YI    +G     + I  FLPE VV++ S
Sbjct: 62  DE--DISTISYIPATMEGTQ-VQQTIFSFLPEDVVILGS 97


>ref|XP_002467649.1| hypothetical protein SORBIDRAFT_01g031620 [Sorghum bicolor]
           gi|241921503|gb|EER94647.1| hypothetical protein
           SORBIDRAFT_01g031620 [Sorghum bicolor]
          Length = 201

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/109 (33%), Positives = 54/109 (49%)
 Frame = -3

Query: 353 SPRTCIAVGDDKEDRFSDDDIAIEILSRLPIESIYDFKCVSKRWCELFSHPSFISAHFQR 174
           +P TC+            DD+ +EILSRLP++S+  FKCVSK W  L SHP     H ++
Sbjct: 10  NPATCLT-----------DDLIVEILSRLPVKSVCRFKCVSKHWLGLISHPD----HRKK 54

Query: 173 SARTVSGIFVQGLHYCACENYIDSKVVEYISTGKKGRHATSKNILGFLP 27
             +T++GIF    ++          V  + +   KG    S + L FLP
Sbjct: 55  LPQTLAGIF----YHTTSSELFPELVRHFTNVTGKGAPLISPS-LSFLP 98


>ref|XP_002329727.1| predicted protein [Populus trichocarpa] gi|222870635|gb|EEF07766.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
 Frame = -3

Query: 302 DDDIAIEILSRLPIESIYDFKCVSKRWCELFSHPSFISAHFQRSARTVSGIFVQGLH-YC 126
           D DI  ++LSRL  + +   KCVSK W +L S  SFI A  Q+    +SG F Q  H YC
Sbjct: 8   DTDIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKK-EPLSGFFFQQRHRYC 66

Query: 125 ACENYIDSKVVEYISTGKKGRHATSKNILGFLPEKVVVI 9
                 D K + Y       R+   +++  FLP+ VVV+
Sbjct: 67  P----DDIKTITYFPV---ERNRLQQDVFAFLPQDVVVL 98


>gb|ABK92768.1| unknown [Populus trichocarpa]
          Length = 384

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 1/99 (1%)
 Frame = -3

Query: 302 DDDIAIEILSRLPIESIYDFKCVSKRWCELFSHPSFISAHFQRSARTVSGIFVQGLH-YC 126
           D DI  ++LSRL  + +   KCVSK W +L S  SFI A  Q+    +SG F Q  H YC
Sbjct: 8   DTDIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKK-EPLSGFFFQQRHRYC 66

Query: 125 ACENYIDSKVVEYISTGKKGRHATSKNILGFLPEKVVVI 9
                 D K + Y       R+   +++  FLP+ VVV+
Sbjct: 67  P----DDIKTITYFPV---ERNRLQQDVFAFLPQDVVVL 98


>emb|CBI39148.3| unnamed protein product [Vitis vinifera]
          Length = 711

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
 Frame = -3

Query: 293 IAIEILSRLPIESIYDFKCVSKRWCELFSHPSFISAHF-QRSARTVSGIFV 144
           I ++ILSRLP++S+  F+CV K WC L SHP F+  H  Q+  R V G+ V
Sbjct: 8   IMVDILSRLPVKSLLRFRCVCKAWCTLISHPQFVETHLRQQHKRPVIGLVV 58