BLASTX nr result

ID: Coptis23_contig00039018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039018
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80789.1| hypothetical protein VITISV_020546 [Vitis vinifera]   120   9e-26
ref|XP_002274835.1| PREDICTED: nodulation receptor kinase-like [...   120   1e-25
ref|XP_002517357.1| serine-threonine protein kinase, plant-type,...   109   3e-22
emb|CBI34946.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002264586.2| PREDICTED: nodulation receptor kinase-like [...   100   9e-20

>emb|CAN80789.1| hypothetical protein VITISV_020546 [Vitis vinifera]
          Length = 623

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/121 (47%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
 Frame = -2

Query: 360 LVFILVFVTMTGVSVCQPSAVDC-KHYYSISPFAKTSTCDSGDWGGFLPSKCCVEGFDGY 184
           +V+I + +     +VC PSA DC   + S+S  + +S+C+ GDWG FL   CC   F GY
Sbjct: 22  VVYIFIVIGAVNFAVCHPSASDCILDFQSLS--SSSSSCEEGDWGSFLNKGCCGAAFGGY 79

Query: 183 LYVLSQRANRTGLIYFDATEQRNCLLSLIGYEKNIMACGFERLQTGGGGCSDFSVTDVVD 4
           LY L + AN TG +Y ++TEQRNCL S+   E +  +CG E+L +G GGCSDFSV DV +
Sbjct: 80  LYSLGKHANETGKVYLNSTEQRNCLTSMKRXEADAFSCGIEKLTSGTGGCSDFSVFDVTE 139

Query: 3   K 1
           K
Sbjct: 140 K 140


>ref|XP_002274835.1| PREDICTED: nodulation receptor kinase-like [Vitis vinifera]
          Length = 594

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/121 (46%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
 Frame = -2

Query: 360 LVFILVFVTMTGVSVCQPSAVDC-KHYYSISPFAKTSTCDSGDWGGFLPSKCCVEGFDGY 184
           +V+I + +     +VC PSA DC   + S+S  + +S+C+ GDWG FL   CC   F GY
Sbjct: 22  VVYIFIVIGAVNFAVCHPSASDCILDFQSLS--SSSSSCEEGDWGSFLNKGCCGAAFGGY 79

Query: 183 LYVLSQRANRTGLIYFDATEQRNCLLSLIGYEKNIMACGFERLQTGGGGCSDFSVTDVVD 4
           LY L + AN TG +Y ++TEQRNCL S+  +E + ++CG E+L +G GGCSDF V DV +
Sbjct: 80  LYSLGKHANETGKVYLNSTEQRNCLTSMKRFEADAVSCGIEKLTSGTGGCSDFFVFDVTE 139

Query: 3   K 1
           K
Sbjct: 140 K 140


>ref|XP_002517357.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223543368|gb|EEF44899.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 605

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/119 (47%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
 Frame = -2

Query: 363 TLVFILVFVTMTGVSVCQPSAVDCKHYYSIS-PFAKTSTCDSGDWGGFLPSKCCVEGFDG 187
           T + I + +    V V QP  V C    S S P    S C  GDWGGFL   CC   F  
Sbjct: 20  TNICIFILMITLRVPVSQPLEVTCTLDLSFSLPDYYVSNCIEGDWGGFLSKNCCGSTFHA 79

Query: 186 YLYVLSQRANRTGLIYFDATEQRNCLLSLIGYEKNIMACGFERLQTGGGGCSDFSVTDV 10
           YL+ L +RANRTG IY D+ EQR+CL  +  YE    +CG ++L +GGGGCSDFSV +V
Sbjct: 80  YLHSLGRRANRTGFIYLDSDEQRSCLDEMGKYEAEDFSCGIDKLTSGGGGCSDFSVANV 138


>emb|CBI34946.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  106 bits (265), Expect = 2e-21
 Identities = 47/96 (48%), Positives = 63/96 (65%)
 Frame = -2

Query: 288 HYYSISPFAKTSTCDSGDWGGFLPSKCCVEGFDGYLYVLSQRANRTGLIYFDATEQRNCL 109
           H    S  + +S+C+ GDWG FL   CC   F GYLY L + AN TG +Y ++TEQRNCL
Sbjct: 33  HLLLFSLSSSSSSCEEGDWGSFLNKGCCGAAFGGYLYSLGKHANETGKVYLNSTEQRNCL 92

Query: 108 LSLIGYEKNIMACGFERLQTGGGGCSDFSVTDVVDK 1
            S+  +E + ++CG E+L +G GGCSDF V DV +K
Sbjct: 93  TSMKRFEADAVSCGIEKLTSGTGGCSDFFVFDVTEK 128


>ref|XP_002264586.2| PREDICTED: nodulation receptor kinase-like [Vitis vinifera]
          Length = 595

 Score =  100 bits (250), Expect = 9e-20
 Identities = 48/123 (39%), Positives = 72/123 (58%)
 Frame = -2

Query: 369 PKTLVFILVFVTMTGVSVCQPSAVDCKHYYSISPFAKTSTCDSGDWGGFLPSKCCVEGFD 190
           P T +  ++  T+    + +    DC      S     S  ++G+WGGFL  K C   F+
Sbjct: 15  PPTSIIFIILTTIISSVLSELLVTDCSLDIQFSSPGNDSYSEAGNWGGFLYHKGCAVAFE 74

Query: 189 GYLYVLSQRANRTGLIYFDATEQRNCLLSLIGYEKNIMACGFERLQTGGGGCSDFSVTDV 10
           GYLY L ++AN+TG I+ ++TEQ+NCL S+    ++ ++CG ERL TG   CSD++V DV
Sbjct: 75  GYLYALGRQANKTGRIFSNSTEQKNCLDSMKSIGEDGLSCGIERLVTGASDCSDYTVKDV 134

Query: 9   VDK 1
            DK
Sbjct: 135 DDK 137


Top