BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039017
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containi...   253   9e-66
emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]   253   9e-66
ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containi...   229   2e-58
ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containi...   228   6e-58
ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containi...   222   3e-56

>ref|XP_002282063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 533

 Score =  253 bits (647), Expect = 9e-66
 Identities = 124/166 (74%), Positives = 140/166 (84%)
 Frame = -2

Query: 500 SKLYGRLVHAHVVEFGFPDDLFVVTGLIEFYSSVGDMGTARRLFDRIPKKDVVLWTAMID 321
           SKL G LVHAHVV FGF +D FVV+ LIEFYS   DMGTAR LFDRIP +DVVLWTAMID
Sbjct: 129 SKLIGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMID 188

Query: 320 GYGKVGDVKEARVLFDEMSERNVISWSAMMAAYSRVSEFKEVLSLFREMQEVGTIPNDSA 141
           GYGK+GDV+ AR+LF++M ERN ISWSA+MAAYSRV +FKEVL LFR MQE GT+PN+S 
Sbjct: 189 GYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESV 248

Query: 140 LVSVLTACANLGALAQGFWVHSYVKHHNLDSNTILSTAITDMYAKC 3
           LVSVLTACA+LGALAQG WVHSY K  N DSN IL+TA+ DMY+KC
Sbjct: 249 LVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKC 294



 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
 Frame = -2

Query: 488 GRLVHAHVVEFGFPDDLFVVTGLIEFYSSVGDMGTARRLFDRIPKKDVVLWTAMIDGYGK 309
           G  VH++  +  F  +  + T L++ YS  G + +A   F  IP KD   W AMI G   
Sbjct: 265 GLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNKDAGAWNAMISGVAM 324

Query: 308 VGDVKEARVLFDEM----SERNVISWSAMMAAYSRVSEFKEVLSLFREM-QEVGTIPNDS 144
            GD  ++  LF++M    ++    ++ A++ A +     KE L LF +M    G  P   
Sbjct: 325 NGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVKEGLKLFEQMSSNYGVEPQLE 384

Query: 143 ALVSVLTACANLGALAQ 93
               ++   A  G LA+
Sbjct: 385 HYACLVDLMARAGMLAE 401


>emb|CAN65024.1| hypothetical protein VITISV_026273 [Vitis vinifera]
          Length = 805

 Score =  253 bits (647), Expect = 9e-66
 Identities = 124/166 (74%), Positives = 140/166 (84%)
 Frame = -2

Query: 500 SKLYGRLVHAHVVEFGFPDDLFVVTGLIEFYSSVGDMGTARRLFDRIPKKDVVLWTAMID 321
           SKL G LVHAHVV FGF +D FVV+ LIEFYS   DMGTAR LFDRIP +DVVLWTAMID
Sbjct: 401 SKLIGCLVHAHVVTFGFDEDPFVVSALIEFYSLNFDMGTARTLFDRIPNRDVVLWTAMID 460

Query: 320 GYGKVGDVKEARVLFDEMSERNVISWSAMMAAYSRVSEFKEVLSLFREMQEVGTIPNDSA 141
           GYGK+GDV+ AR+LF++M ERN ISWSA+MAAYSRV +FKEVL LFR MQE GT+PN+S 
Sbjct: 461 GYGKMGDVEHARILFEDMPERNAISWSAVMAAYSRVGDFKEVLCLFRRMQEAGTMPNESV 520

Query: 140 LVSVLTACANLGALAQGFWVHSYVKHHNLDSNTILSTAITDMYAKC 3
           LVSVLTACA+LGALAQG WVHSY K  N DSN IL+TA+ DMY+KC
Sbjct: 521 LVSVLTACAHLGALAQGLWVHSYAKQCNFDSNPILATALVDMYSKC 566



 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
 Frame = -2

Query: 488 GRLVHAHVVEFGFPDDLFVVTGLIEFYSSVGDMGTARRLFDRIPKKDVVLWTAMIDGYGK 309
           G  VH++  +  F  +  + T L++ YS  G + +A   F  IP KD   W AMI G   
Sbjct: 537 GLWVHSYAKQCNFDSNPILATALVDMYSKCGCVESALSTFQGIPNKDAGAWNAMISGVAM 596

Query: 308 VGDVKEARVLFDEM----SERNVISWSAMMAAYSRVSEFKEVLSLFREM-QEVGTIPNDS 144
            GD  ++  LF++M    ++    ++ A++ A +     +E L LF +M    G  P   
Sbjct: 597 NGDAWKSLELFNKMISNGTQPTETTFVAVLTACTHARLVREGLKLFEQMSSNYGVEPQXE 656

Query: 143 ALVSVLTACANLGALAQ 93
               ++   A  G LA+
Sbjct: 657 HYACLVDLMARAGMLAE 673


>ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 487

 Score =  229 bits (584), Expect = 2e-58
 Identities = 113/176 (64%), Positives = 139/176 (78%)
 Frame = -2

Query: 530 KACMDMVLPYSKLYGRLVHAHVVEFGFPDDLFVVTGLIEFYSSVGDMGTARRLFDRIPKK 351
           KAC  +V    K  G LVHAHV+  G+ +D FVV+ L+EFYS + D+  AR LFD+   K
Sbjct: 118 KACA-LVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYS-LFDLKVARVLFDKSSGK 175

Query: 350 DVVLWTAMIDGYGKVGDVKEARVLFDEMSERNVISWSAMMAAYSRVSEFKEVLSLFREMQ 171
           DVV+WT M+DGYGKVGD++ ARVLFDEM ERNVISWSAMMAAYSRVS+F+EVL LFR+MQ
Sbjct: 176 DVVVWTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQ 235

Query: 170 EVGTIPNDSALVSVLTACANLGALAQGFWVHSYVKHHNLDSNTILSTAITDMYAKC 3
           +   +PNDS +VSVLTACA+LGA+ QG W+HSY K + LDSN IL+TA+ DMY+KC
Sbjct: 236 KKNIVPNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKC 291



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 7/155 (4%)
 Frame = -2

Query: 488 GRLVHAHVVEFGFPDDLFVVTGLIEFYSSVGDMGTARRLFDRIPKKDVVLWTAMIDGYGK 309
           G  +H++   +G   +  + T L++ YS  G + +A  +F+ I  KD   W AMI G+  
Sbjct: 262 GLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAGAWNAMISGFAM 321

Query: 308 VGDVKEARVLFDEM----SERNVISWSAMMAAYSRVSEFKEVLSLFREMQEVGTIP---N 150
            G+V ++  LFD+M    ++    ++ +++AA +     +  L  F +M  V  +     
Sbjct: 322 TGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQMYPVYRVQPQFE 381

Query: 149 DSALVSVLTACANLGALAQGFWVHSYVKHHNLDSN 45
             A V  L A A +   A+ F         N+D+N
Sbjct: 382 HYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDAN 416


>ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 528

 Score =  228 bits (580), Expect = 6e-58
 Identities = 112/176 (63%), Positives = 138/176 (78%)
 Frame = -2

Query: 530 KACMDMVLPYSKLYGRLVHAHVVEFGFPDDLFVVTGLIEFYSSVGDMGTARRLFDRIPKK 351
           KAC  +V    K  G LVHAHV+  G+ +D FVV+ L+EFYS + D+  AR LFD+   K
Sbjct: 118 KACA-LVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYS-LFDLKVARVLFDKSSGK 175

Query: 350 DVVLWTAMIDGYGKVGDVKEARVLFDEMSERNVISWSAMMAAYSRVSEFKEVLSLFREMQ 171
           DVV+WT M+DGYGKVGD++ ARVLFDEM ERNVISWSAMMAAYSRVS+F+EVL LFR+MQ
Sbjct: 176 DVVVWTVMVDGYGKVGDIESARVLFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQ 235

Query: 170 EVGTIPNDSALVSVLTACANLGALAQGFWVHSYVKHHNLDSNTILSTAITDMYAKC 3
           +   +PNDS + SVLTACA+LGA+ QG W+HSY K + LDSN IL+TA+ DMY+KC
Sbjct: 236 KKNIVPNDSVIASVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKC 291



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 7/155 (4%)
 Frame = -2

Query: 488 GRLVHAHVVEFGFPDDLFVVTGLIEFYSSVGDMGTARRLFDRIPKKDVVLWTAMIDGYGK 309
           G  +H++   +G   +  + T L++ YS  G + +A  +F+ I  KD   W AMI G+  
Sbjct: 262 GLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAGAWNAMISGFAM 321

Query: 308 VGDVKEARVLFDEM----SERNVISWSAMMAAYSRVSEFKEVLSLFREMQEVGTIP---N 150
            G+V ++  LFD+M    ++    ++ +++AA +     +  L  F +M  V  +     
Sbjct: 322 TGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMVERGLEFFDQMYPVYRVQPQFE 381

Query: 149 DSALVSVLTACANLGALAQGFWVHSYVKHHNLDSN 45
             A V  L A A +   A+ F         N+D+N
Sbjct: 382 HYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDAN 416


>ref|XP_003525932.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 526

 Score =  222 bits (565), Expect = 3e-56
 Identities = 113/178 (63%), Positives = 139/178 (78%), Gaps = 2/178 (1%)
 Frame = -2

Query: 530 KACMDMVLPYS--KLYGRLVHAHVVEFGFPDDLFVVTGLIEFYSSVGDMGTARRLFDRIP 357
           KAC+ + LP S   + GRLVH HVV+FG  +D +VV+  IEFYS   ++ TAR LFD   
Sbjct: 114 KACIAL-LPSSPSNIVGRLVHGHVVKFGLRNDPYVVSAFIEFYSVSREVDTARVLFDETS 172

Query: 356 KKDVVLWTAMIDGYGKVGDVKEARVLFDEMSERNVISWSAMMAAYSRVSEFKEVLSLFRE 177
            KDVVL TAM+DGYGK+G+VK AR +FD+M ERN +SWSAMMAAYSRVS+FKEVL+LF E
Sbjct: 173 YKDVVLGTAMVDGYGKMGNVKSAREVFDKMPERNAVSWSAMMAAYSRVSDFKEVLALFTE 232

Query: 176 MQEVGTIPNDSALVSVLTACANLGALAQGFWVHSYVKHHNLDSNTILSTAITDMYAKC 3
           MQ  GT PN+S LV+VLTACA+LGAL QG WVHSY +  +L+SN IL+TA+ DMY+KC
Sbjct: 233 MQNEGTEPNESILVTVLTACAHLGALTQGLWVHSYARRFHLESNPILATALVDMYSKC 290



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/88 (35%), Positives = 54/88 (61%)
 Frame = -2

Query: 344 VLWTAMIDGYGKVGDVKEARVLFDEMSERNVISWSAMMAAYSRVSEFKEVLSLFREMQEV 165
           +L TA++D Y K G V+ A  +FD + +++  +W+AM++  +   +  + L LFR+M   
Sbjct: 278 ILATALVDMYSKCGCVESALSVFDCIVDKDAGAWNAMISGEALNGDAGKSLQLFRQMAAS 337

Query: 164 GTIPNDSALVSVLTACANLGALAQGFWV 81
            T PN++  V+VLTAC +   + QG W+
Sbjct: 338 RTKPNETTFVAVLTACTHAKMVQQGLWL 365