BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039013
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...   155   3e-36
dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protei...   141   5e-32
gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japo...   141   5e-32
ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30

>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  155 bits (392), Expect = 3e-36
 Identities = 75/103 (72%), Positives = 86/103 (83%)
 Frame = +3

Query: 6   MYANVGRWADMANVRKLMRDKGVKKEPGCSWIEVARKVHVFLVNDTLHPEVQEVYNFLEE 185
           MYA VGRW D+A VRKLMRDKGVKKEPGCSWIEV  KVHVFLV+D +HPEVQ VYN+LEE
Sbjct: 639 MYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEVENKVHVFLVDDIVHPEVQAVYNYLEE 698

Query: 186 LGGKMRKLGYVPDTKFVLHDVGFEQKSMYYLLTVKSWQLGMGY 314
           LG KMRKLGY+PDTKFVLHD+  EQK   Y+L+  S +L +G+
Sbjct: 699 LGLKMRKLGYIPDTKFVLHDMESEQKE--YVLSTHSEKLAVGF 739


>dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
           gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR)
           repeat-containing protein-like protein [Oryza sativa
           Japonica Group]
          Length = 808

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/102 (65%), Positives = 78/102 (76%)
 Frame = +3

Query: 9   YANVGRWADMANVRKLMRDKGVKKEPGCSWIEVARKVHVFLVNDTLHPEVQEVYNFLEEL 188
           Y+  GRW D A VRKLMRD+GVKKEPGCSWIEV  K+HVFLV DT HPE QEVY FLE +
Sbjct: 649 YSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVI 708

Query: 189 GGKMRKLGYVPDTKFVLHDVGFEQKSMYYLLTVKSWQLGMGY 314
           G +MRKLGYVPDTKFVLHD+   +K   Y+L   S +L +G+
Sbjct: 709 GARMRKLGYVPDTKFVLHDMEPHEKE--YILFAHSEKLAVGF 748


>gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/102 (65%), Positives = 78/102 (76%)
 Frame = +3

Query: 9   YANVGRWADMANVRKLMRDKGVKKEPGCSWIEVARKVHVFLVNDTLHPEVQEVYNFLEEL 188
           Y+  GRW D A VRKLMRD+GVKKEPGCSWIEV  K+HVFLV DT HPE QEVY FLE +
Sbjct: 647 YSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVI 706

Query: 189 GGKMRKLGYVPDTKFVLHDVGFEQKSMYYLLTVKSWQLGMGY 314
           G +MRKLGYVPDTKFVLHD+   +K   Y+L   S +L +G+
Sbjct: 707 GARMRKLGYVPDTKFVLHDMEPHEKE--YILFAHSEKLAVGF 746


>ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/103 (61%), Positives = 83/103 (80%)
 Frame = +3

Query: 6   MYANVGRWADMANVRKLMRDKGVKKEPGCSWIEVARKVHVFLVNDTLHPEVQEVYNFLEE 185
           +YA+VGRW D+A VRKLMRD+ V+KEP CSWIEV  KVHVF+V+D +HPEV  VY +LE+
Sbjct: 637 IYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQ 696

Query: 186 LGGKMRKLGYVPDTKFVLHDVGFEQKSMYYLLTVKSWQLGMGY 314
           LG +M+KLGY+PDTKFVLHD+ +EQK   + L+  S +L +G+
Sbjct: 697 LGLEMKKLGYIPDTKFVLHDMEYEQKE--HALSTHSEKLAVGF 737


>ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  135 bits (340), Expect = 3e-30
 Identities = 62/103 (60%), Positives = 83/103 (80%)
 Frame = +3

Query: 6   MYANVGRWADMANVRKLMRDKGVKKEPGCSWIEVARKVHVFLVNDTLHPEVQEVYNFLEE 185
           +YA+VGRW ++A VRKLMRD+ V+KEP CSWIEV  KVHVF+V+D +HPEV  VY +LE+
Sbjct: 637 IYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEVLSVYRYLEQ 696

Query: 186 LGGKMRKLGYVPDTKFVLHDVGFEQKSMYYLLTVKSWQLGMGY 314
           LG +M+KLGY+PDTKFVLHD+ +EQK   + L+  S +L +G+
Sbjct: 697 LGLEMKKLGYIPDTKFVLHDMEYEQKE--HALSTHSEKLAVGF 737