BLASTX nr result

ID: Coptis23_contig00039004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039004
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002836099.1| acetyl-CoA carboxylase carboxyltransferase b...   283   1e-74
ref|YP_001004195.1| acetyl-CoA carboxylase carboxyltransferase b...   278   4e-73
gb|ADD31600.1| acetyl-CoA carboxylase carboxyltransferase beta s...   272   2e-71
gb|ABI18038.1| acetyl co-A carboxylase [Coula edulis]                 272   2e-71
gb|ABI18049.1| acetyl co-A carboxylase [Heisteria cauliflora]         272   2e-71

>ref|YP_002836099.1| acetyl-CoA carboxylase carboxyltransferase beta subunit
           [Megaleranthis saniculifolia]
           gi|226933891|gb|ACO92024.1| acetyl-CoA carboxylase
           carboxyltransferase beta subunit [Megaleranthis
           saniculifolia]
          Length = 491

 Score =  283 bits (723), Expect = 1e-74
 Identities = 144/151 (95%), Positives = 146/151 (96%), Gaps = 3/151 (1%)
 Frame = -2

Query: 446 LKLNICEQCGYHLKMSGSERIELLIDPGTWGAMDEDMVSVDPIEFHSE---YKDRIDSYQ 276
           LKLNICEQCGYHLKMS SERIELLIDPGTWGAMDEDMVSVDPIEFHSE   YKDRIDSYQ
Sbjct: 242 LKLNICEQCGYHLKMSSSERIELLIDPGTWGAMDEDMVSVDPIEFHSEEEPYKDRIDSYQ 301

Query: 275 KKTGLTEAVQTGIGQLNGISIAIGIMDFQFMGGSMGSVVGEKITRLIEYATNRFLPLIIV 96
           KKTGLTEAVQTGIGQLNGIS+AIGIMDFQFMGGSMGSVVGEKITRLIEYATNR LPLIIV
Sbjct: 302 KKTGLTEAVQTGIGQLNGISLAIGIMDFQFMGGSMGSVVGEKITRLIEYATNRSLPLIIV 361

Query: 95  CASGGARMQEGSLSLMQMAKISSALYDYQSN 3
           CASGGARMQEGSLSLMQMAKISSALY+YQSN
Sbjct: 362 CASGGARMQEGSLSLMQMAKISSALYNYQSN 392


>ref|YP_001004195.1| acetyl-CoA carboxylase carboxyltransferase beta subunit [Ranunculus
           macranthus] gi|221271856|sp|A1XGP7.1|ACCD_RANMC RecName:
           Full=Acetyl-coenzyme A carboxylase carboxyl transferase
           subunit beta, chloroplastic; Short=ACCase subunit beta;
           Short=Acetyl-CoA carboxylase carboxyltransferase subunit
           beta gi|85540813|gb|ABC70765.1| acetyl-CoA carboxylase
           carboxyltransferase beta subunit [Ranunculus macranthus]
          Length = 496

 Score =  278 bits (710), Expect = 4e-73
 Identities = 141/151 (93%), Positives = 144/151 (95%), Gaps = 3/151 (1%)
 Frame = -2

Query: 446 LKLNICEQCGYHLKMSGSERIELLIDPGTWGAMDEDMVSVDPIEFHSE---YKDRIDSYQ 276
           LKL+ICEQCGYHLKMS SERIE+LIDPGTW AMDEDMVSVDPIEFHSE   YKDRIDSYQ
Sbjct: 247 LKLHICEQCGYHLKMSSSERIEILIDPGTWDAMDEDMVSVDPIEFHSEEEPYKDRIDSYQ 306

Query: 275 KKTGLTEAVQTGIGQLNGISIAIGIMDFQFMGGSMGSVVGEKITRLIEYATNRFLPLIIV 96
           KKTGLTEAVQTGIGQLNGISIAIG+MDFQFMGGSMGSVVGEKITRLIEYATN FLPLIIV
Sbjct: 307 KKTGLTEAVQTGIGQLNGISIAIGVMDFQFMGGSMGSVVGEKITRLIEYATNGFLPLIIV 366

Query: 95  CASGGARMQEGSLSLMQMAKISSALYDYQSN 3
           CASGGARMQEGSLSLMQMAKISSA YDYQSN
Sbjct: 367 CASGGARMQEGSLSLMQMAKISSASYDYQSN 397


>gb|ADD31600.1| acetyl-CoA carboxylase carboxyltransferase beta subunit protein
           [Berberidopsis corallina]
          Length = 501

 Score =  272 bits (696), Expect = 2e-71
 Identities = 136/150 (90%), Positives = 142/150 (94%), Gaps = 3/150 (2%)
 Frame = -2

Query: 443 KLNICEQCGYHLKMSGSERIELLIDPGTWGAMDEDMVSVDPIEFHSE---YKDRIDSYQK 273
           K+NICEQCGYHLKMS S+RIEL IDPGTW  MDEDMVS+DPIEFHSE   YKDRIDSYQ+
Sbjct: 258 KMNICEQCGYHLKMSSSDRIELSIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQR 317

Query: 272 KTGLTEAVQTGIGQLNGISIAIGIMDFQFMGGSMGSVVGEKITRLIEYATNRFLPLIIVC 93
           KTGLTEAVQTGIGQLNGI IAIG+MDFQFMGGSMGSVVGEKITRLIEYATN+FLPLIIVC
Sbjct: 318 KTGLTEAVQTGIGQLNGIPIAIGVMDFQFMGGSMGSVVGEKITRLIEYATNKFLPLIIVC 377

Query: 92  ASGGARMQEGSLSLMQMAKISSALYDYQSN 3
           ASGGARMQEGSLSLMQMAKISSALYDYQSN
Sbjct: 378 ASGGARMQEGSLSLMQMAKISSALYDYQSN 407


>gb|ABI18038.1| acetyl co-A carboxylase [Coula edulis]
          Length = 352

 Score =  272 bits (696), Expect = 2e-71
 Identities = 136/150 (90%), Positives = 142/150 (94%), Gaps = 3/150 (2%)
 Frame = -2

Query: 443 KLNICEQCGYHLKMSGSERIELLIDPGTWGAMDEDMVSVDPIEFHSE---YKDRIDSYQK 273
           K+NICEQCGYHLKMS S+RIEL IDPGTW  MDEDMVS+DPIEFHSE   YKDRIDSYQ+
Sbjct: 187 KMNICEQCGYHLKMSSSDRIELSIDPGTWDPMDEDMVSLDPIEFHSEEELYKDRIDSYQR 246

Query: 272 KTGLTEAVQTGIGQLNGISIAIGIMDFQFMGGSMGSVVGEKITRLIEYATNRFLPLIIVC 93
           KTGLTEAVQTGIGQLNGI IAIG+MDFQFMGGSMGSVVGEKITRLIEYATN+FLPLIIVC
Sbjct: 247 KTGLTEAVQTGIGQLNGIPIAIGVMDFQFMGGSMGSVVGEKITRLIEYATNKFLPLIIVC 306

Query: 92  ASGGARMQEGSLSLMQMAKISSALYDYQSN 3
           ASGGARMQEGSLSLMQMAKISSALYDYQSN
Sbjct: 307 ASGGARMQEGSLSLMQMAKISSALYDYQSN 336


>gb|ABI18049.1| acetyl co-A carboxylase [Heisteria cauliflora]
          Length = 290

 Score =  272 bits (696), Expect = 2e-71
 Identities = 136/150 (90%), Positives = 142/150 (94%), Gaps = 3/150 (2%)
 Frame = -2

Query: 443 KLNICEQCGYHLKMSGSERIELLIDPGTWGAMDEDMVSVDPIEFHSE---YKDRIDSYQK 273
           K+ ICEQCGYHLKMS S+RIELLIDPGTW  MDEDMVS+DPIEFHSE   YKDRIDSYQ+
Sbjct: 114 KMKICEQCGYHLKMSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEELYKDRIDSYQR 173

Query: 272 KTGLTEAVQTGIGQLNGISIAIGIMDFQFMGGSMGSVVGEKITRLIEYATNRFLPLIIVC 93
           KTGLTEAVQTGIGQLNGI IAIG+MDFQFMGGSMGSVVGEKITRLIEYATN+FLPLIIVC
Sbjct: 174 KTGLTEAVQTGIGQLNGIPIAIGVMDFQFMGGSMGSVVGEKITRLIEYATNKFLPLIIVC 233

Query: 92  ASGGARMQEGSLSLMQMAKISSALYDYQSN 3
           ASGGARMQEGSLSLMQMAKISSALYDYQSN
Sbjct: 234 ASGGARMQEGSLSLMQMAKISSALYDYQSN 263


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