BLASTX nr result

ID: Coptis23_contig00039001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00039001
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002333858.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002333856.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
 Frame = -1

Query: 279 KKYEKLVVGYFIGRRPGYG------YVKDIVSKTWRLQHKFTMQAQGEKMFTFKFESEED 118
           K++E  VV YF+G    +G      ++  ++   WR      + +QG  +F   FES   
Sbjct: 29  KRWENAVVAYFLGHDSTFGPTSFNRFINSLIDSEWRKYGNVKVYSQGSGVFVLDFESAHG 88

Query: 117 R*KVLDIGS---FHVGSKLLVIRPWKLFIESEVLELKTLPVW 1
             KVL +G    F+ GSK  +++PW   +  E+ ELK+ PVW
Sbjct: 89  --KVLALGEGPRFYDGSKPFILKPWSRDLSLEIKELKSAPVW 128


>ref|XP_002333858.1| predicted protein [Populus trichocarpa] gi|222838785|gb|EEE77136.1|
           predicted protein [Populus trichocarpa]
          Length = 156

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
 Frame = -1

Query: 279 KKYEKLVVGYFIGRRPGYG------YVKDIVSKTWRLQHKFTMQAQGEKMFTFKFESEED 118
           K++E  VV YF+G    +G      ++ +++   WR      + +QG  +F   FES   
Sbjct: 29  KRWENAVVAYFLGHDSTFGPTSFNKFINNLIDSEWRKYGNVKVYSQGSGVFVLDFESAHG 88

Query: 117 R*KVLDIGS-FHVGSKLLVIRPWKLFIESEVLELKTLPVW 1
           +   L  G  F+ GSK  +++PW   +  E+ ELK+ P+W
Sbjct: 89  KELALGEGPRFYDGSKPFILKPWSRDLSLEIKELKSAPIW 128


>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
 Frame = -1

Query: 279 KKYEKLVVGYFIGRRPGYG------YVKDIVSKTWRLQHKFTMQAQGEKMFTFKFESEED 118
           K++E  VV YF+G    +G      ++ +++   WR      + ++G  +F   FES   
Sbjct: 29  KRWENAVVAYFLGHDSTFGPTSFNRFINNLIDSEWRKYGNVKVYSKGSGVFVLDFESAHG 88

Query: 117 R*KVLDIGS-FHVGSKLLVIRPWKLFIESEVLELKTLPVW 1
           +   L  G  F+ GSK  +++PW   +  E+ ELK+ P+W
Sbjct: 89  KELALGEGPRFYDGSKPFILKPWSRDLSLEIKELKSAPIW 128


>ref|XP_002333856.1| predicted protein [Populus trichocarpa] gi|222838783|gb|EEE77134.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
 Frame = -1

Query: 279 KKYEKLVVGYFIGRRPGYG------YVKDIVSKTWRLQHKFTMQAQGEKMFTFKFESEED 118
           K++E  VV YF+G    +G      ++ +++   WR      + ++G  +F   FES   
Sbjct: 29  KRWENAVVAYFLGHDSTFGPPSFNRFINNLIDSEWRKYGNVKVYSKGSGVFVLDFESAHG 88

Query: 117 R*KVLDIGS-FHVGSKLLVIRPWKLFIESEVLELKTLPVW 1
           +   L  G  F+ GSK  +++PW   +  E+ ELK+ P+W
Sbjct: 89  KELALGEGPWFYDGSKPFILKPWSRDMSLEIEELKSAPIW 128


>ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|222874005|gb|EEF11136.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
 Frame = -1

Query: 279 KKYEKLVVGYFIGRRPGYG------YVKDIVSKTWRLQHKFTMQAQGEKMFTFKFESEED 118
           K++E  VV YF+G    +G      ++ +++   WR      + +QG  +F   FES   
Sbjct: 29  KRWENAVVAYFLGHDSTFGPTSFNKFINNLIDSEWRKYGNVKVYSQGSGVFVLDFESVHG 88

Query: 117 R*KVLDIGS-FHVGSKLLVIRPWKLFIESEVLELKTLPVW 1
           +   L  G  F+ G K  +++PW   +  E+ ELK+ P+W
Sbjct: 89  KELALGEGPRFYDGRKPFILKPWSRDMSLEIEELKSAPIW 128


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