BLASTX nr result

ID: Coptis23_contig00038988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038988
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513898.1| conserved hypothetical protein [Ricinus comm...   114   1e-23
ref|XP_002328100.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_003545485.1| PREDICTED: uncharacterized protein LOC100800...   102   4e-20
ref|XP_002306581.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_003519484.1| PREDICTED: uncharacterized protein LOC100789...   101   7e-20

>ref|XP_002513898.1| conserved hypothetical protein [Ricinus communis]
           gi|223546984|gb|EEF48481.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 243

 Score =  114 bits (284), Expect = 1e-23
 Identities = 71/172 (41%), Positives = 97/172 (56%), Gaps = 1/172 (0%)
 Frame = +3

Query: 42  ATDEPPLAPLPRKYAKDEPQLDEGNESQFLPTHDSQAGTYVVQVPRVQIYRVPPPENAIL 221
           AT  PP  P P     D P +     SQ  P  +S  GTYVVQVP+ QIYRVPPPENA++
Sbjct: 5   ATSPPPPPPQPTLILHD-PVI-----SQSPPIFES--GTYVVQVPKDQIYRVPPPENALI 56

Query: 222 AERYRKPTQQRRLCSSCFTKCFLLTLMVALVLIICG-AIFYLVLRPQNPTFSIERVIVKN 398
            ER+R P Q++R     F  C  L +  A++ I  G  + +   + +NP F ++R IVKN
Sbjct: 57  VERHRNPQQKKRTRYCSFFCCCFLIVATAVIAIALGIGLSFAFFKSKNPEFRVQRFIVKN 116

Query: 399 THSKRQNRLEFYITLKADNPNAQMSIDYQIGGSTSLFYKKKEIAAGETASLH 554
             S   +  ++ ITLK  NPN +  I Y  GG  SL YK +++AAG+  + H
Sbjct: 117 NTS--HHYPDYDITLKVRNPNDKSDILYMQGGVASLLYKDQKMAAGKFPTFH 166


>ref|XP_002328100.1| predicted protein [Populus trichocarpa] gi|222837615|gb|EEE75980.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  107 bits (268), Expect = 1e-21
 Identities = 63/178 (35%), Positives = 96/178 (53%), Gaps = 4/178 (2%)
 Frame = +3

Query: 15  PLFPSPSVYATDEPPLAPLPRKYAKDEPQLDEGNESQFLPTHDSQAGTYVVQVPRVQIYR 194
           P   SP      +PP  P    Y +   + D     + +P      GTYV+Q+P+ Q+YR
Sbjct: 7   PRDDSPPQTTEFKPP--PAAAHYPESPTKPDAPRSEKPVPP---PPGTYVIQIPKDQVYR 61

Query: 195 VPPPENAILAERYRKPTQQRRLCSSCFTKCFLLTLMVALVLI--ICGAIFYLVLRPQNPT 368
           VPPPENA   ER  +    R  C  C   C+LL L+ AL+ +  +  A+FY V RP++P 
Sbjct: 62  VPPPENAKRHERLTRRKPSRSPCCCCL--CWLLALLTALIFLVGVAAAVFYFVFRPESPD 119

Query: 369 FSIERVIVK--NTHSKRQNRLEFYITLKADNPNAQMSIDYQIGGSTSLFYKKKEIAAG 536
           +S+ER+ +   N  S R    EF +T++A+NPN ++ I Y+ G S  ++Y   ++A G
Sbjct: 120 YSVERLSISGFNLTSSRWVSPEFDVTVRANNPNDKIGIYYRRGSSVDVYYDSVKLATG 177


>ref|XP_003545485.1| PREDICTED: uncharacterized protein LOC100800674 isoform 1 [Glycine
           max] gi|356554301|ref|XP_003545486.1| PREDICTED:
           uncharacterized protein LOC100800674 isoform 2 [Glycine
           max]
          Length = 273

 Score =  102 bits (254), Expect = 4e-20
 Identities = 62/177 (35%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
 Frame = +3

Query: 27  SPSVYATDEPPLAPLPRKYAKDEPQLDEGNESQFLPTHDSQAGTYVVQVPRVQIYRVPPP 206
           SPSV A  +PP +P         P      +    P      GTYV+++P+ Q+YRVPPP
Sbjct: 10  SPSVSADSQPP-SPQDSSVVPKPPSPPSPEKPVPPP------GTYVIKIPKDQVYRVPPP 62

Query: 207 ENAILAERYRKPTQQRRLCSSCFTKCFLLTLMVALV--LIICGAIFYLVLRPQNPTFSIE 380
           ENA   ++Y +   +R  C  CF  C+L+ ++  LV  L I   + YLV RP+ P +SIE
Sbjct: 63  ENARRYDQYARRKHRRSRCCCCF--CWLIGILFILVVLLAIAAGVLYLVFRPEAPKYSIE 120

Query: 381 RVIVKNTHSKRQNRL-----EFYITLKADNPNAQMSIDYQIGGSTSLFYKKKEIAAG 536
            + V+  +    + +     EF +T+KADNPN ++ I Y    S  +FYK   +  G
Sbjct: 121 NITVRGINLTSPSSVAAISPEFNVTVKADNPNDKIGIRYLKDSSAEVFYKDARLCNG 177


>ref|XP_002306581.1| predicted protein [Populus trichocarpa] gi|222856030|gb|EEE93577.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  102 bits (254), Expect = 4e-20
 Identities = 59/175 (33%), Positives = 94/175 (53%), Gaps = 5/175 (2%)
 Frame = +3

Query: 45  TDEPPLAPLPRKYAKDEPQLDEGNESQFLPTHDSQAGTYVVQVPRVQIYRVPPPENAILA 224
           T++ P  P      K    +   N+  F P      GTYV+Q+PR QIYRVPPP NA +A
Sbjct: 2   TEQVPTVPHSDAIPKIHDPVATSNQPFFEP------GTYVIQIPRDQIYRVPPPGNASVA 55

Query: 225 ERYRKPTQQR-RLC--SSCFTKCFLLTLMVALVLIICGAIFYLVLRPQNPTFSIERVIVK 395
           +R R P Q++ + C   SCF  CF+       V +    + +++L+P++P F ++R +VK
Sbjct: 56  QRQRNPHQKKHKSCCGCSCFWCCFIAIASGIAVAVTIVGLSFILLKPKDPEFQVQRFVVK 115

Query: 396 N--THSKRQNRLEFYITLKADNPNAQMSIDYQIGGSTSLFYKKKEIAAGETASLH 554
           N      + +   + I L   N N + SI YQ GG+ SL ++++ +A G+  + H
Sbjct: 116 NPQVSKHKYSYTNYDIRLNVHNSNRRSSILYQQGGAVSLSFRQQNVATGKFPTFH 170


>ref|XP_003519484.1| PREDICTED: uncharacterized protein LOC100789647 [Glycine max]
          Length = 273

 Score =  101 bits (252), Expect = 7e-20
 Identities = 64/177 (36%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
 Frame = +3

Query: 27  SPSVYATDEPPLAPLPRKYAKDEPQLDEGNESQFLPTHDSQAGTYVVQVPRVQIYRVPPP 206
           SPSV A D  P +P        +P L   +E    P      GTYV+++P+ Q+YRVPPP
Sbjct: 10  SPSVSA-DSQPASPQDSSVVP-KPPLPPSSEKPVPPP-----GTYVIKIPKDQVYRVPPP 62

Query: 207 ENAILAERYRKPTQQRRLCSSCFTKCFLLTLMVALV--LIICGAIFYLVLRPQNPTFSIE 380
           ENA   ++Y +   +R  C  CF  C+L+ ++  LV  L I   + YLV RP+ P +SIE
Sbjct: 63  ENARRYDQYTRRKHRRSRCCCCF--CWLIGILFILVVFLAIAAGVLYLVFRPEEPKYSIE 120

Query: 381 RVIVKNTH-----SKRQNRLEFYITLKADNPNAQMSIDYQIGGSTSLFYKKKEIAAG 536
            + V+  +     S       F +T+KADNPN ++ I Y    S  +FYK   +  G
Sbjct: 121 NIAVRGINLTSPSSTAAMSPVFNVTVKADNPNDKIGIRYLKDSSAEVFYKDARLCNG 177


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