BLASTX nr result

ID: Coptis23_contig00038987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038987
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275038.1| PREDICTED: chaperone protein ClpB1-like [Vit...   202   2e-50
emb|CAN83664.1| hypothetical protein VITISV_031478 [Vitis vinifera]   202   2e-50
ref|XP_002532538.1| conserved hypothetical protein [Ricinus comm...   201   4e-50
ref|XP_002323392.1| predicted protein [Populus trichocarpa] gi|2...   200   9e-50
ref|XP_002309392.1| predicted protein [Populus trichocarpa] gi|2...   200   1e-49

>ref|XP_002275038.1| PREDICTED: chaperone protein ClpB1-like [Vitis vinifera]
          Length = 848

 Score =  202 bits (515), Expect = 2e-50
 Identities = 102/114 (89%), Positives = 107/114 (93%)
 Frame = -2

Query: 344 MRAGGCTVQQALTAEAASVVKQAVNLARRRGHAQVTPLHVANTMLSSSTGLLRTACLQSH 165
           MRAGGCTVQQALTAEAA VVKQAV LARRRGHAQVTPLHVANTML+++ GLLRTACLQSH
Sbjct: 1   MRAGGCTVQQALTAEAAGVVKQAVTLARRRGHAQVTPLHVANTMLAATNGLLRTACLQSH 60

Query: 164 SHPLQCKALELCFNVALNRLPASTSSPMLGHQSHNPSLSNALVAAFKRAQAQQR 3
           SHPLQCKALELCFNVALNRLPASTSSPMLG  S +PS+SNALVAAFKRAQA QR
Sbjct: 61  SHPLQCKALELCFNVALNRLPASTSSPMLGPHSQHPSISNALVAAFKRAQAHQR 114


>emb|CAN83664.1| hypothetical protein VITISV_031478 [Vitis vinifera]
          Length = 828

 Score =  202 bits (515), Expect = 2e-50
 Identities = 102/114 (89%), Positives = 107/114 (93%)
 Frame = -2

Query: 344 MRAGGCTVQQALTAEAASVVKQAVNLARRRGHAQVTPLHVANTMLSSSTGLLRTACLQSH 165
           MRAGGCTVQQALTAEAA VVKQAV LARRRGHAQVTPLHVANTML+++ GLLRTACLQSH
Sbjct: 1   MRAGGCTVQQALTAEAAGVVKQAVTLARRRGHAQVTPLHVANTMLAATNGLLRTACLQSH 60

Query: 164 SHPLQCKALELCFNVALNRLPASTSSPMLGHQSHNPSLSNALVAAFKRAQAQQR 3
           SHPLQCKALELCFNVALNRLPASTSSPMLG  S +PS+SNALVAAFKRAQA QR
Sbjct: 61  SHPLQCKALELCFNVALNRLPASTSSPMLGPHSQHPSISNALVAAFKRAQAHQR 114


>ref|XP_002532538.1| conserved hypothetical protein [Ricinus communis]
           gi|223527727|gb|EEF29832.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 882

 Score =  201 bits (512), Expect = 4e-50
 Identities = 104/115 (90%), Positives = 107/115 (93%), Gaps = 1/115 (0%)
 Frame = -2

Query: 344 MRAGGCTVQQALTAEAASVVKQAVNLARRRGHAQVTPLHVANTMLSSSTGLLRTACLQSH 165
           MRAGGCTVQQALT EAA+VVKQAV LARRRGHAQVTPLHVANTMLSSSTGLLRTACLQSH
Sbjct: 1   MRAGGCTVQQALTTEAATVVKQAVTLARRRGHAQVTPLHVANTMLSSSTGLLRTACLQSH 60

Query: 164 SHPLQCKALELCFNVALNRLPASTSSPMLG-HQSHNPSLSNALVAAFKRAQAQQR 3
           SHPLQCKALELCFNVALNRLPASTSSP+LG H    PS+SNALVAAFKRAQA QR
Sbjct: 61  SHPLQCKALELCFNVALNRLPASTSSPVLGTHAQQYPSISNALVAAFKRAQAHQR 115


>ref|XP_002323392.1| predicted protein [Populus trichocarpa] gi|222868022|gb|EEF05153.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score =  200 bits (509), Expect = 9e-50
 Identities = 103/115 (89%), Positives = 107/115 (93%), Gaps = 1/115 (0%)
 Frame = -2

Query: 344 MRAGGCTVQQALTAEAASVVKQAVNLARRRGHAQVTPLHVANTMLSSSTGLLRTACLQSH 165
           MRAGGCTVQQALTAEAASV+KQAV LARRRGHAQVTPLHVANTMLS+STGLLRTACLQSH
Sbjct: 1   MRAGGCTVQQALTAEAASVIKQAVTLARRRGHAQVTPLHVANTMLSASTGLLRTACLQSH 60

Query: 164 SHPLQCKALELCFNVALNRLPASTSSPMLGHQSHN-PSLSNALVAAFKRAQAQQR 3
           SHPLQCKALELCFNVALNRLP STSSPM+G  S   PS+SNALVAAFKRAQA QR
Sbjct: 61  SHPLQCKALELCFNVALNRLPTSTSSPMIGTPSQQFPSISNALVAAFKRAQAHQR 115


>ref|XP_002309392.1| predicted protein [Populus trichocarpa] gi|222855368|gb|EEE92915.1|
           predicted protein [Populus trichocarpa]
          Length = 841

 Score =  200 bits (508), Expect = 1e-49
 Identities = 102/115 (88%), Positives = 107/115 (93%), Gaps = 1/115 (0%)
 Frame = -2

Query: 344 MRAGGCTVQQALTAEAASVVKQAVNLARRRGHAQVTPLHVANTMLSSSTGLLRTACLQSH 165
           MRAGGCTVQQALTA+AASV+KQAV LARRRGHAQVTPLHVANTMLS+STGL RTACLQSH
Sbjct: 1   MRAGGCTVQQALTADAASVIKQAVTLARRRGHAQVTPLHVANTMLSASTGLFRTACLQSH 60

Query: 164 SHPLQCKALELCFNVALNRLPASTSSPMLG-HQSHNPSLSNALVAAFKRAQAQQR 3
           SHPLQCKALELCFNVALNRLPASTSSP+LG H    PS+SNALVAAFKRAQA QR
Sbjct: 61  SHPLQCKALELCFNVALNRLPASTSSPILGTHSQQFPSISNALVAAFKRAQAHQR 115


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