BLASTX nr result

ID: Coptis23_contig00038986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038986
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530012.1| PREDICTED: uncharacterized protein LOC100786...    62   4e-08
ref|XP_002276247.1| PREDICTED: uncharacterized protein LOC100249...    62   4e-08
ref|XP_002322057.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002317914.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002532151.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_003530012.1| PREDICTED: uncharacterized protein LOC100786564 [Glycine max]
          Length = 592

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/92 (39%), Positives = 44/92 (47%)
 Frame = +3

Query: 3   KNFSLDGDFFKFSPKLLSSRTAKPLETSSGDAIGDSCTVHSTSKGSSEWRSSFCYXXXXX 182
           ++ + D  FF ++P  L ++     E    +  GDSCTV STSK SSEWRSS        
Sbjct: 211 ESLARDERFFAYAPTQLEAKKLIVEEKDYEEIYGDSCTVGSTSKSSSEWRSSINCRDSGT 270

Query: 183 XXXXXXXXXXXCPTLESCTAAQMYDEEMMFYD 278
                      CP  ES T  Q YDEEM F D
Sbjct: 271 EDPFSSSSRRSCPKWESYTVFQKYDEEMSFLD 302


>ref|XP_002276247.1| PREDICTED: uncharacterized protein LOC100249284 [Vitis vinifera]
           gi|297734207|emb|CBI15454.3| unnamed protein product
           [Vitis vinifera]
          Length = 601

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/91 (39%), Positives = 43/91 (47%)
 Frame = +3

Query: 6   NFSLDGDFFKFSPKLLSSRTAKPLETSSGDAIGDSCTVHSTSKGSSEWRSSFCYXXXXXX 185
           NF+ D  F  F+P    ++     E  + +  GDS TV STSK SSEWRSS  +      
Sbjct: 223 NFTKDEKFLIFAPPQSEAKKFHVQEKDNEETCGDSYTVGSTSKSSSEWRSSINFRDSGTE 282

Query: 186 XXXXXXXXXXCPTLESCTAAQMYDEEMMFYD 278
                     CP  ES T  Q YDEEM F D
Sbjct: 283 DPFSSSSRRSCPKWESYTVFQKYDEEMTFLD 313


>ref|XP_002322057.1| predicted protein [Populus trichocarpa] gi|222869053|gb|EEF06184.1|
           predicted protein [Populus trichocarpa]
          Length = 421

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/91 (39%), Positives = 42/91 (46%)
 Frame = +3

Query: 6   NFSLDGDFFKFSPKLLSSRTAKPLETSSGDAIGDSCTVHSTSKGSSEWRSSFCYXXXXXX 185
           N S+D  F  ++P  L     +  E    +  GDSCTV STSK SSEWRS          
Sbjct: 23  NLSVDEKFLIYAPNRLELGKLQVQEKDEEEIFGDSCTVGSTSKSSSEWRS--LIKDSGTE 80

Query: 186 XXXXXXXXXXCPTLESCTAAQMYDEEMMFYD 278
                     CP  ES T  Q YDEEMM+ D
Sbjct: 81  DPFSSSSRRSCPRWESYTVFQKYDEEMMYLD 111


>ref|XP_002317914.1| predicted protein [Populus trichocarpa] gi|222858587|gb|EEE96134.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/76 (46%), Positives = 37/76 (48%)
 Frame = +3

Query: 51  LSSRTAKPLETSSGDAIGDSCTVHSTSKGSSEWRSSFCYXXXXXXXXXXXXXXXXCPTLE 230
           L SR  +  E    +  GDSCTV STSK SSEWRSS                   CP  E
Sbjct: 1   LESRKLQVQEKDEEEIFGDSCTVGSTSKSSSEWRSSI--KDSGTEDPFSSSSRRSCPRWE 58

Query: 231 SCTAAQMYDEEMMFYD 278
           S T  Q YDEEMMF D
Sbjct: 59  SYTVFQKYDEEMMFLD 74


>ref|XP_002532151.1| conserved hypothetical protein [Ricinus communis]
           gi|223528161|gb|EEF30225.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 600

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 36/87 (41%), Positives = 39/87 (44%)
 Frame = +3

Query: 18  DGDFFKFSPKLLSSRTAKPLETSSGDAIGDSCTVHSTSKGSSEWRSSFCYXXXXXXXXXX 197
           DG F  F+     S+     E    +  GDS TV STSK SSEWRSS             
Sbjct: 229 DGRFIIFARTQFESKKLHVQEKDDEEIFGDSYTVGSTSKSSSEWRSSI--KDSGTEDPFS 286

Query: 198 XXXXXXCPTLESCTAAQMYDEEMMFYD 278
                 CP  ES T  Q YDEEMMF D
Sbjct: 287 SSSRRSCPKWESYTVFQKYDEEMMFLD 313


Top