BLASTX nr result

ID: Coptis23_contig00038962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038962
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549478.1| PREDICTED: probable mitochondrial chaperone ...   140   1e-31
ref|XP_002329630.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_002534483.1| ATP binding protein, putative [Ricinus commu...   138   4e-31
ref|XP_002269013.2| PREDICTED: probable mitochondrial chaperone ...   138   5e-31
emb|CAN62143.1| hypothetical protein VITISV_023956 [Vitis vinifera]   138   5e-31

>ref|XP_003549478.1| PREDICTED: probable mitochondrial chaperone BCS1-B-like [Glycine
           max]
          Length = 512

 Score =  140 bits (352), Expect = 1e-31
 Identities = 75/127 (59%), Positives = 90/127 (70%), Gaps = 2/127 (1%)
 Frame = +3

Query: 3   DMHIFMSFCSFPALKILLGNYLGLSEGDIEKNLCSEFEEVMDKAEMTPADISEILIKNRR 182
           DMHIFMS+CSFPALKILL NYLG  E ++E+ +    EEV+D A MTPADISE+LIKNRR
Sbjct: 384 DMHIFMSYCSFPALKILLKNYLGCEECELEEPILKRLEEVVDVARMTPADISEVLIKNRR 443

Query: 183 DKEKAVLELLNALKIKAEKNRVVEASRVKDSSAVEEEQEKRAL--ESPKEGCELLKNCNK 356
            +EKAV ELL  LK++AE N      RV +    EEEQEKRAL  ESPK+  E+  NC +
Sbjct: 444 KREKAVEELLETLKLRAEMNEKNGVLRVTNGVEEEEEQEKRALDSESPKQESEIEDNCKE 503

Query: 357 GNDEEAK 377
             +EE K
Sbjct: 504 EEEEEEK 510


>ref|XP_002329630.1| predicted protein [Populus trichocarpa] gi|222870511|gb|EEF07642.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  139 bits (350), Expect = 2e-31
 Identities = 75/115 (65%), Positives = 92/115 (80%), Gaps = 6/115 (5%)
 Frame = +3

Query: 3   DMHIFMSFCSFPALKILLGNYLGLSEGDIEKNLCSEFEEVMDKAEMTPADISEILIKNRR 182
           DMH+FMS+CSFPAL+ILL NYLG +E D+++ +  E EEV+DKAEMTPADISE+LIKNRR
Sbjct: 360 DMHVFMSYCSFPALRILLKNYLGNAESDLDEGVLKELEEVIDKAEMTPADISELLIKNRR 419

Query: 183 DKEKAVLELLNALKIKAE-KNRVVEASRVKDSSAV-----EEEQEKRALESPKEG 329
           +K++AV+ELL ALK KAE K +  E  R K+ + V     EEEQEKRALESPKEG
Sbjct: 420 NKDRAVIELLEALKNKAEMKLKSGECVREKNLNDVGEEEEEEEQEKRALESPKEG 474


>ref|XP_002534483.1| ATP binding protein, putative [Ricinus communis]
           gi|223525217|gb|EEF27900.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 518

 Score =  138 bits (348), Expect = 4e-31
 Identities = 77/132 (58%), Positives = 97/132 (73%), Gaps = 9/132 (6%)
 Frame = +3

Query: 3   DMHIFMSFCSFPALKILLGNYLGLS---EGDIEKNLCSEFEEVMDKAEMTPADISEILIK 173
           DMHIFMS+CSFPALKILL NYLG     EGD+E  +  E E+V+++AEMTPAD+SE+LIK
Sbjct: 382 DMHIFMSYCSFPALKILLKNYLGYDHEKEGDLEDGILEELEQVINEAEMTPADVSEVLIK 441

Query: 174 NRRD---KEKAVLELLNALKIKAEKNRVVEASRVKDSSAV--EEEQEKRALESPKEGCEL 338
           +RR+   K +A+ ELL ALK +AE+N      R K+ + +  EEEQEKRALESPKEGCE 
Sbjct: 442 HRRNKXXKNRALRELLGALKERAERNLKNGGLREKNLNDIVEEEEQEKRALESPKEGCEC 501

Query: 339 -LKNCNKGNDEE 371
             +NC KG D +
Sbjct: 502 EEENCKKGEDHD 513


>ref|XP_002269013.2| PREDICTED: probable mitochondrial chaperone BCS1-B-like [Vitis
           vinifera] gi|297735391|emb|CBI17831.3| unnamed protein
           product [Vitis vinifera]
          Length = 514

 Score =  138 bits (347), Expect = 5e-31
 Identities = 74/128 (57%), Positives = 97/128 (75%), Gaps = 5/128 (3%)
 Frame = +3

Query: 3   DMHIFMSFCSFPALKILLGNYLGLSEGDIEKNLCSEFEEVMDKAEMTPADISEILIKNRR 182
           DMHIFMS+C+FPALKILL NYLG SE D+   +  E E V+DKA+MTPADISE+LIKNRR
Sbjct: 382 DMHIFMSYCTFPALKILLQNYLGFSEPDMGLQIMEEIEAVIDKAQMTPADISEVLIKNRR 441

Query: 183 DKEKAVLELLNALKIKAEKNRVV--EASRVKDSSAV-EEEQEKRALESPKEGC--ELLKN 347
            K+KA+ ELL AL+  AE+ +     ++R K+S+ V EEEQEKRALE+PK+GC  E  ++
Sbjct: 442 HKDKALSELLEALRNMAERRKKENWRSAREKNSTEVEEEEQEKRALENPKQGCDEEFEES 501

Query: 348 CNKGNDEE 371
           C K  +++
Sbjct: 502 CKKEEEDD 509


>emb|CAN62143.1| hypothetical protein VITISV_023956 [Vitis vinifera]
          Length = 501

 Score =  138 bits (347), Expect = 5e-31
 Identities = 74/128 (57%), Positives = 97/128 (75%), Gaps = 5/128 (3%)
 Frame = +3

Query: 3   DMHIFMSFCSFPALKILLGNYLGLSEGDIEKNLCSEFEEVMDKAEMTPADISEILIKNRR 182
           DMHIFMS+C+FPALKILL NYLG SE D+   +  E E V+DKA+MTPADISE+LIKNRR
Sbjct: 369 DMHIFMSYCTFPALKILLQNYLGFSEPDMGLQIMEEIEAVIDKAQMTPADISEVLIKNRR 428

Query: 183 DKEKAVLELLNALKIKAEKNRVV--EASRVKDSSAV-EEEQEKRALESPKEGC--ELLKN 347
            K+KA+ ELL AL+  AE+ +     ++R K+S+ V EEEQEKRALE+PK+GC  E  ++
Sbjct: 429 HKDKALSELLEALRNMAERRKKENWRSAREKNSTEVEEEEQEKRALENPKQGCDEEFEES 488

Query: 348 CNKGNDEE 371
           C K  +++
Sbjct: 489 CKKEEEDD 496


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