BLASTX nr result

ID: Coptis23_contig00038952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038952
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267536.1| PREDICTED: uncharacterized protein LOC100253...   137   1e-30
ref|XP_002514568.1| conserved hypothetical protein [Ricinus comm...   134   6e-30
ref|XP_002311420.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_002315994.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_004135422.1| PREDICTED: uncharacterized protein LOC101217...   111   7e-23

>ref|XP_002267536.1| PREDICTED: uncharacterized protein LOC100253093 [Vitis vinifera]
           gi|297738213|emb|CBI27414.3| unnamed protein product
           [Vitis vinifera]
          Length = 417

 Score =  137 bits (344), Expect = 1e-30
 Identities = 78/166 (46%), Positives = 106/166 (63%), Gaps = 19/166 (11%)
 Frame = -3

Query: 442 FGIRRGHIARFTDRTSTCVVTLPPSYSVPARKRTTARSMSESIRGSELWSAVSKKMVTAT 263
           FG++RGHIARFTDR S C   LP  Y++  ++  +  S + SI  SEL S  S+K+++ +
Sbjct: 94  FGMKRGHIARFTDRNSACADPLPAGYTLRTKRMMSTPSRNNSILKSELSSVNSRKILSIS 153

Query: 262 KSLRKTRTN---DESVERSVTELSIKQDSVFN----------------RNDPRVDNISPY 140
           ++   TR N   D S+E++V+E+ IK   V                  +  P V+++ PY
Sbjct: 154 RA--PTRANSIYDRSLEQAVSEIKIKDGLVIKGIVAAEPAEPRACGCVQPPPIVEDVCPY 211

Query: 139 SAIENISVQKLAPEYKIGMENLIKTKTPNLKASELWRDKPVVLHCV 2
           SAIEN+SVQKLAPEYKIGME L+KT TP +KASELWRDKP VL C+
Sbjct: 212 SAIENVSVQKLAPEYKIGMERLVKT-TPPMKASELWRDKPAVLLCI 256


>ref|XP_002514568.1| conserved hypothetical protein [Ricinus communis]
           gi|223546172|gb|EEF47674.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 444

 Score =  134 bits (338), Expect = 6e-30
 Identities = 71/165 (43%), Positives = 101/165 (61%), Gaps = 18/165 (10%)
 Frame = -3

Query: 442 FGIRRGHIARFTDRTSTCVVTLPPSYSVPARKRTTARSMSESIRGSELWSAVSKKMVTAT 263
           FG++RGH+ARFTDRT  C   LP SY++P RK T+A S +ES   S  + +++ K + +T
Sbjct: 94  FGMKRGHVARFTDRTIACSEALPKSYALPPRKMTSAASGNESTFKS--FKSINSKYMQST 151

Query: 262 KSLRKTRT--NDESVERSVTELSIKQDSVFN----------------RNDPRVDNISPYS 137
                  +   D+++E+S+ E  I    +F                 +  P VD ++PYS
Sbjct: 152 SKYPSNHSINYDKALEQSLAEFKINDGHIFKGIVAAGPAEPRACGCVQPPPVVDEVAPYS 211

Query: 136 AIENISVQKLAPEYKIGMENLIKTKTPNLKASELWRDKPVVLHCV 2
            IENIS++KL PEYK+GME L+KT+ P +KASELWRDKP VL C+
Sbjct: 212 FIENISIEKLTPEYKVGMERLVKTRAPPMKASELWRDKPAVLLCI 256


>ref|XP_002311420.1| predicted protein [Populus trichocarpa] gi|222851240|gb|EEE88787.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  134 bits (337), Expect = 8e-30
 Identities = 75/164 (45%), Positives = 104/164 (63%), Gaps = 17/164 (10%)
 Frame = -3

Query: 442 FGIRRGHIARFTDRTSTCVVTLPPSYS-VPARKRTTARSMSESIRGSELWSAVSKKMVTA 266
           FG++RGHIARF DRTS C   L  SY+ + AR R +  S + S    + +++V+ + + A
Sbjct: 94  FGMKRGHIARFVDRTSACADPLLKSYAPLTARNRNSIVSRNNS--NFKSYASVNSRKIQA 151

Query: 265 TKSLRKTRTNDESVERSVTELSIKQDSVFN----------------RNDPRVDNISPYSA 134
           + S+     +D+ +E+S+ +  IK D +F                 +  P VD+++PYSA
Sbjct: 152 SSSMN----HDKPLEQSLADFKIKDDHIFKGIVAAGPAEPRACGCVQPPPVVDSVAPYSA 207

Query: 133 IENISVQKLAPEYKIGMENLIKTKTPNLKASELWRDKPVVLHCV 2
           IENISVQKL PEYKIGME L+KTKTP +KASELWRDKP VL C+
Sbjct: 208 IENISVQKLTPEYKIGMERLVKTKTPPMKASELWRDKPAVLLCI 251


>ref|XP_002315994.1| predicted protein [Populus trichocarpa] gi|222865034|gb|EEF02165.1|
           predicted protein [Populus trichocarpa]
          Length = 406

 Score =  126 bits (316), Expect = 2e-27
 Identities = 71/163 (43%), Positives = 98/163 (60%), Gaps = 16/163 (9%)
 Frame = -3

Query: 442 FGIRRGHIARFTDRTSTCVVTLPPSYSVPARKRTTARSMSESIRGSELWSAVSKKMVTAT 263
           FG++RGHIARF DRT  C   L  SY+ P   R    ++S +    + +S+VS K +   
Sbjct: 94  FGMKRGHIARFMDRTGACEDPLLKSYA-PLTARKMNSTVSRNNSNFKSYSSVSSKKMQTI 152

Query: 262 KSLRKTRTNDESVERSVTELSIKQDSVFN----------------RNDPRVDNISPYSAI 131
            S+      D+S+E+S+ +  IK   +F                 +  P VD+++PYS+I
Sbjct: 153 SSMNY----DKSLEQSLADFKIKDGYIFKGIVAAGPAELRACGCVQPPPVVDSVAPYSSI 208

Query: 130 ENISVQKLAPEYKIGMENLIKTKTPNLKASELWRDKPVVLHCV 2
           ENISVQKL PEYKIGME+L+KTKTP +KA ELWRDKP V+ C+
Sbjct: 209 ENISVQKLTPEYKIGMEHLVKTKTPPMKAVELWRDKPAVILCI 251


>ref|XP_004135422.1| PREDICTED: uncharacterized protein LOC101217484 [Cucumis sativus]
           gi|449493522|ref|XP_004159330.1| PREDICTED:
           uncharacterized protein LOC101230345 [Cucumis sativus]
          Length = 413

 Score =  111 bits (277), Expect = 7e-23
 Identities = 66/163 (40%), Positives = 90/163 (55%), Gaps = 16/163 (9%)
 Frame = -3

Query: 442 FGIRRGHIARFTDRTSTCVVTLPPSYSVPARKRTTARSMSESIRGSELWSAVSKKMVTAT 263
           F ++RGHIARF DR S+CV      +  P    +  R+           S  SK+M    
Sbjct: 94  FHMKRGHIARFHDRKSSCVDPSTNKFDAPLASTSIKRTYQ---------SNSSKRM---- 140

Query: 262 KSLRKTRTNDESVERSVTELSIKQDSVFNR---------------NDPR-VDNISPYSAI 131
           +S+R     D++VE++++E  I+    F                   P  VD I+PYSAI
Sbjct: 141 QSMRSRNFQDKTVEQAMSEFKIEDGYEFKGIVATELAGHIACGCVQPPHIVDKIAPYSAI 200

Query: 130 ENISVQKLAPEYKIGMENLIKTKTPNLKASELWRDKPVVLHCV 2
           ENIS+QKL PEYKIGME L+KTKTP +KAS LW+DKP ++ C+
Sbjct: 201 ENISIQKLTPEYKIGMERLVKTKTPPMKASSLWQDKPAIILCI 243


Top