BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038937
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591190.1| Single-stranded DNA-binding protein [Medicag...   185   3e-45
gb|ABD28355.2| Single-stranded DNA binding [Medicago truncatula]      185   3e-45
ref|XP_002319495.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45
ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding prote...   183   1e-44
ref|XP_002529271.1| Single-stranded DNA-binding protein, mitocho...   182   2e-44

>ref|XP_003591190.1| Single-stranded DNA-binding protein [Medicago truncatula]
           gi|355480238|gb|AES61441.1| Single-stranded DNA-binding
           protein [Medicago truncatula]
           gi|388493454|gb|AFK34793.1| unknown [Medicago
           truncatula]
          Length = 212

 Score =  185 bits (470), Expect = 3e-45
 Identities = 87/104 (83%), Positives = 100/104 (96%)
 Frame = +2

Query: 2   PVQKILRNGKTVTIFTVGTGGMYDQRILGAENLPKPAQWHRIAVHNEELGAYSVQQLVKG 181
           PVQKILRNGK VTIFTVGTGGMYDQRI+G+++LPKPAQWHRIAVHNE LGAY+VQQL K 
Sbjct: 95  PVQKILRNGKNVTIFTVGTGGMYDQRIVGSKDLPKPAQWHRIAVHNEVLGAYAVQQLFKN 154

Query: 182 SSVFVEGDIETRVYNDSINGQVKNVPEICVRRDGKVRLIKTGES 313
           SSV+VEG+IETRVYNDSING+VK++PEICVRRDGK+RLI++GES
Sbjct: 155 SSVYVEGEIETRVYNDSINGEVKSIPEICVRRDGKLRLIRSGES 198


>gb|ABD28355.2| Single-stranded DNA binding [Medicago truncatula]
          Length = 216

 Score =  185 bits (470), Expect = 3e-45
 Identities = 87/104 (83%), Positives = 100/104 (96%)
 Frame = +2

Query: 2   PVQKILRNGKTVTIFTVGTGGMYDQRILGAENLPKPAQWHRIAVHNEELGAYSVQQLVKG 181
           PVQKILRNGK VTIFTVGTGGMYDQRI+G+++LPKPAQWHRIAVHNE LGAY+VQQL K 
Sbjct: 95  PVQKILRNGKNVTIFTVGTGGMYDQRIVGSKDLPKPAQWHRIAVHNEVLGAYAVQQLFKN 154

Query: 182 SSVFVEGDIETRVYNDSINGQVKNVPEICVRRDGKVRLIKTGES 313
           SSV+VEG+IETRVYNDSING+VK++PEICVRRDGK+RLI++GES
Sbjct: 155 SSVYVEGEIETRVYNDSINGEVKSIPEICVRRDGKLRLIRSGES 198


>ref|XP_002319495.1| predicted protein [Populus trichocarpa] gi|222857871|gb|EEE95418.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  184 bits (466), Expect = 8e-45
 Identities = 84/104 (80%), Positives = 100/104 (96%)
 Frame = +2

Query: 2   PVQKILRNGKTVTIFTVGTGGMYDQRILGAENLPKPAQWHRIAVHNEELGAYSVQQLVKG 181
           PVQKILRNG+TVTIFTVGTGGM+DQRI+G+++LPKPAQWHRIAVHN+ LGAY+VQQL K 
Sbjct: 97  PVQKILRNGRTVTIFTVGTGGMFDQRIIGSKDLPKPAQWHRIAVHNDSLGAYAVQQLAKN 156

Query: 182 SSVFVEGDIETRVYNDSINGQVKNVPEICVRRDGKVRLIKTGES 313
           SSV+VEGDIE RVYNDSI+G+VKN+PEICVRRDGK+RLI++GE+
Sbjct: 157 SSVYVEGDIEIRVYNDSISGEVKNIPEICVRRDGKIRLIRSGEN 200


>ref|XP_002278555.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
           [Vitis vinifera] gi|296089740|emb|CBI39559.3| unnamed
           protein product [Vitis vinifera]
          Length = 208

 Score =  183 bits (465), Expect = 1e-44
 Identities = 88/104 (84%), Positives = 99/104 (95%)
 Frame = +2

Query: 2   PVQKILRNGKTVTIFTVGTGGMYDQRILGAENLPKPAQWHRIAVHNEELGAYSVQQLVKG 181
           PVQKILRNG+TVTIFTVGTGGM+DQRI G ++LPKPAQWHRIAVHNE LGAY+VQQLVK 
Sbjct: 91  PVQKILRNGRTVTIFTVGTGGMFDQRI-GGKDLPKPAQWHRIAVHNEPLGAYAVQQLVKN 149

Query: 182 SSVFVEGDIETRVYNDSINGQVKNVPEICVRRDGKVRLIKTGES 313
           SSV+VEGDIE RVYNDSING+VK+VPEIC+RRDG++RLIKTGES
Sbjct: 150 SSVYVEGDIEVRVYNDSINGEVKHVPEICIRRDGRIRLIKTGES 193


>ref|XP_002529271.1| Single-stranded DNA-binding protein, mitochondrial precursor,
           putative [Ricinus communis] gi|223531260|gb|EEF33103.1|
           Single-stranded DNA-binding protein, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 213

 Score =  182 bits (463), Expect = 2e-44
 Identities = 83/104 (79%), Positives = 100/104 (96%)
 Frame = +2

Query: 2   PVQKILRNGKTVTIFTVGTGGMYDQRILGAENLPKPAQWHRIAVHNEELGAYSVQQLVKG 181
           PVQKILRNG+TVTIFTVGTGGM+DQRI+GA++LPKPAQWHRIAVHNE LGAY+VQQL K 
Sbjct: 96  PVQKILRNGRTVTIFTVGTGGMFDQRIVGAKDLPKPAQWHRIAVHNETLGAYAVQQLAKN 155

Query: 182 SSVFVEGDIETRVYNDSINGQVKNVPEICVRRDGKVRLIKTGES 313
           SSV+VEG+IETRVYNDSI+G+VKN+PEIC+RRDGK+RL+ +G++
Sbjct: 156 SSVYVEGEIETRVYNDSISGEVKNIPEICIRRDGKIRLVTSGKN 199