BLASTX nr result
ID: Coptis23_contig00038936
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00038936 (254 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAM12783.1| putative expansin [Capsicum annuum] 120 1e-25 ref|XP_002285891.1| PREDICTED: expansin-A11 [Vitis vinifera] gi|... 120 2e-25 ref|XP_002510588.1| Alpha-expansin 11 precursor, putative [Ricin... 117 8e-25 gb|AET25522.1| expansin [Chimonanthus praecox] 116 2e-24 gb|AAG01875.1|AF291659_1 alpha-expansin 3 [Striga asiatica] 116 2e-24 >gb|AAM12783.1| putative expansin [Capsicum annuum] Length = 256 Score = 120 bits (301), Expect = 1e-25 Identities = 60/79 (75%), Positives = 66/79 (83%), Gaps = 3/79 (3%) Frame = +2 Query: 26 MAMKIVLALIVVYGLISIV---DAFSASGWTKAHATFYCGSDASGTMGGACGYGNLYSTG 196 MA +LAL ++GL +I+ +AFSASGW AHATFY GSDASGTMGGACGYGNLYSTG Sbjct: 1 MAKICILALGFIFGLFNILLSANAFSASGWMSAHATFYGGSDASGTMGGACGYGNLYSTG 60 Query: 197 YGTRTAALSTALFNDGASC 253 YGT TAALSTALFNDGASC Sbjct: 61 YGTNTAALSTALFNDGASC 79 >ref|XP_002285891.1| PREDICTED: expansin-A11 [Vitis vinifera] gi|302141731|emb|CBI18934.3| unnamed protein product [Vitis vinifera] Length = 256 Score = 120 bits (300), Expect = 2e-25 Identities = 59/71 (83%), Positives = 64/71 (90%), Gaps = 1/71 (1%) Frame = +2 Query: 44 LALI-VVYGLISIVDAFSASGWTKAHATFYCGSDASGTMGGACGYGNLYSTGYGTRTAAL 220 LA++ V+ S V+AF+ASGWTKAHATFY GSDASGTMGGACGYGNLYSTGYGTRTAAL Sbjct: 9 LAMVRVICYFFSNVNAFTASGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAAL 68 Query: 221 STALFNDGASC 253 STALFNDGASC Sbjct: 69 STALFNDGASC 79 >ref|XP_002510588.1| Alpha-expansin 11 precursor, putative [Ricinus communis] gi|223551289|gb|EEF52775.1| Alpha-expansin 11 precursor, putative [Ricinus communis] Length = 256 Score = 117 bits (294), Expect = 8e-25 Identities = 55/58 (94%), Positives = 56/58 (96%) Frame = +2 Query: 80 VDAFSASGWTKAHATFYCGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASC 253 V+AFS SGWTKAHATFY GSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASC Sbjct: 22 VNAFSPSGWTKAHATFYGGSDASGTMGGACGYGNLYSTGYGTRTAALSTALFNDGASC 79 >gb|AET25522.1| expansin [Chimonanthus praecox] Length = 256 Score = 116 bits (291), Expect = 2e-24 Identities = 58/78 (74%), Positives = 65/78 (83%), Gaps = 1/78 (1%) Frame = +2 Query: 23 EMAMKIVLALIVVYGLISI-VDAFSASGWTKAHATFYCGSDASGTMGGACGYGNLYSTGY 199 E + LA++ + L +I V+ FS SGWTKAHATFY GSDASGTMGGACG+GNLYSTGY Sbjct: 2 ETQFALALAMMSLLCLETIGVEGFSPSGWTKAHATFYGGSDASGTMGGACGFGNLYSTGY 61 Query: 200 GTRTAALSTALFNDGASC 253 GTRTAALSTALFNDGASC Sbjct: 62 GTRTAALSTALFNDGASC 79 >gb|AAG01875.1|AF291659_1 alpha-expansin 3 [Striga asiatica] Length = 257 Score = 116 bits (290), Expect = 2e-24 Identities = 57/76 (75%), Positives = 66/76 (86%) Frame = +2 Query: 26 MAMKIVLALIVVYGLISIVDAFSASGWTKAHATFYCGSDASGTMGGACGYGNLYSTGYGT 205 +++ IVLA + + LI + F+ASGWT+AHATFY GSDASGTMGGACGYGNLYSTGYGT Sbjct: 6 VSLPIVLA-VCFFCLIINANGFTASGWTQAHATFYGGSDASGTMGGACGYGNLYSTGYGT 64 Query: 206 RTAALSTALFNDGASC 253 RTAALSTALFN+GASC Sbjct: 65 RTAALSTALFNNGASC 80