BLASTX nr result

ID: Coptis23_contig00038900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038900
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321862.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35
ref|XP_002510883.1| protein phosphatase 2c, putative [Ricinus co...   150   1e-34
ref|XP_002318858.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-33
ref|XP_002271035.2| PREDICTED: probable protein phosphatase 2C 7...   137   9e-31
emb|CBI24479.3| unnamed protein product [Vitis vinifera]              137   9e-31

>ref|XP_002321862.1| predicted protein [Populus trichocarpa] gi|222868858|gb|EEF05989.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score =  152 bits (384), Expect = 3e-35
 Identities = 79/160 (49%), Positives = 98/160 (61%), Gaps = 32/160 (20%)
 Frame = -2

Query: 385 DAISVRPDFCRPVISYRKPVHFFAVYDGHGGSQVATLCKESMHVFLEGELMRETDASVGT 206
           DAISVR  FC P I+ R+P+H F VYDGHGG  VA LC+E MHV +E EL R  +++ G+
Sbjct: 71  DAISVRTSFCLPGINRRRPLHLFGVYDGHGGYHVAALCREKMHVLIEEELER-VESTCGS 129

Query: 205 ASTSSSEVEIQESWKFALEKSFERMDEIALSTCACG------------------------ 98
             +     E +E W+  +++S+ERMDE+A+STCACG                        
Sbjct: 130 GESGEFGAEWEEMWRGVMKRSYERMDEVAMSTCACGSEGFQCECRPTQMILGGSTAVVAV 189

Query: 97  --------ANCGDSRAVLSRGGRAIPVSFDHKPDRPDELA 2
                   ANCGDSRAVLSRGGRAIP+S DHKPDR DELA
Sbjct: 190 LTPEHIIVANCGDSRAVLSRGGRAIPLSVDHKPDRQDELA 229


>ref|XP_002510883.1| protein phosphatase 2c, putative [Ricinus communis]
           gi|223549998|gb|EEF51485.1| protein phosphatase 2c,
           putative [Ricinus communis]
          Length = 398

 Score =  150 bits (378), Expect = 1e-34
 Identities = 85/173 (49%), Positives = 99/173 (57%), Gaps = 45/173 (26%)
 Frame = -2

Query: 385 DAISVRPDFCRPVISYRKPVHFFAVYDGHGGSQVATLCKESMHVFLEGELMRETDASVGT 206
           DA++VR   C+P I+ R+PVH+FAVYDGHGGS VA LC+E MHV LEGELMR      G 
Sbjct: 88  DAVAVRISLCKPDINNRRPVHYFAVYDGHGGSHVAALCRERMHVVLEGELMRTDHTDNGE 147

Query: 205 A------STSSSEVEI-------QESWKFALEKSFERMDEIALSTCACG----------- 98
           +      S+S  E E        +E WK  L +SF++MDE ALSTCACG           
Sbjct: 148 SGEGRGKSSSPKEREFREGKYGWEEQWKSVLIRSFKKMDEAALSTCACGSIGFDCGCHPM 207

Query: 97  ---------------------ANCGDSRAVLSRGGRAIPVSFDHKPDRPDELA 2
                                ANCGDSRAVL RGGRAIP+S DHKPDR DE A
Sbjct: 208 EVALGGSTAVVAILTPEHIIVANCGDSRAVLCRGGRAIPLSVDHKPDRSDEFA 260


>ref|XP_002318858.1| predicted protein [Populus trichocarpa] gi|222859531|gb|EEE97078.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  146 bits (369), Expect = 1e-33
 Identities = 76/160 (47%), Positives = 99/160 (61%), Gaps = 32/160 (20%)
 Frame = -2

Query: 385 DAISVRPDFCRPVISYRKPVHFFAVYDGHGGSQVATLCKESMHVFLEGELMRETDASVGT 206
           DAISVR +F +P ++ R+PVH F V+DGHGG+ VA LC+E MHV +E EL R  D++  +
Sbjct: 90  DAISVRINFFQPEVNRRRPVHLFGVFDGHGGAHVAALCRERMHVLIEEELAR-VDSTRVS 148

Query: 205 ASTSSSEVEIQESWKFALEKSFERMDEIALSTCACG------------------------ 98
           + +     E +E W+  +++S+ERMDE+A+ TCACG                        
Sbjct: 149 SESGGGGAEWEEMWRGVMKRSYERMDEVAMGTCACGSEWFKCGCHPMQMALGGSTAVVAV 208

Query: 97  --------ANCGDSRAVLSRGGRAIPVSFDHKPDRPDELA 2
                   ANCGDSRAVLSRGGRAIP+S DHKPDR DELA
Sbjct: 209 LSPEHIIVANCGDSRAVLSRGGRAIPLSVDHKPDRSDELA 248


>ref|XP_002271035.2| PREDICTED: probable protein phosphatase 2C 75 [Vitis vinifera]
          Length = 413

 Score =  137 bits (345), Expect = 9e-31
 Identities = 74/163 (45%), Positives = 90/163 (55%), Gaps = 35/163 (21%)
 Frame = -2

Query: 385 DAISVRPDFCRPVISYRKPVHFFAVYDGHGGSQVATLCKESMHVFLEGELMRETDASVGT 206
           DA+SV+ + CRP I+   PVHFF VYDGHGGS VA LC+E MH+ LE ELM   +   G 
Sbjct: 74  DAVSVQTNLCRPEINRGLPVHFFGVYDGHGGSHVANLCREMMHLILEQELMSVDNTQEGA 133

Query: 205 --ASTSSSEVEIQESWKFALEKSFERMDEIALSTCACG---------------------- 98
                   E+E +E W  AL++ F+RMDE+ L++C C                       
Sbjct: 134 HGGEPGGKEIENKEGWTRALKRCFQRMDEVVLNSCLCRNDWRQCSCRGIMEVEMTGTTAV 193

Query: 97  -----------ANCGDSRAVLSRGGRAIPVSFDHKPDRPDELA 2
                      ANCGDSR VL R G AIP+SFDHKPDR DELA
Sbjct: 194 VAIITTDHIVVANCGDSRGVLCREGTAIPLSFDHKPDRSDELA 236


>emb|CBI24479.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  137 bits (345), Expect = 9e-31
 Identities = 74/163 (45%), Positives = 90/163 (55%), Gaps = 35/163 (21%)
 Frame = -2

Query: 385 DAISVRPDFCRPVISYRKPVHFFAVYDGHGGSQVATLCKESMHVFLEGELMRETDASVGT 206
           DA+SV+ + CRP I+   PVHFF VYDGHGGS VA LC+E MH+ LE ELM   +   G 
Sbjct: 74  DAVSVQTNLCRPEINRGLPVHFFGVYDGHGGSHVANLCREMMHLILEQELMSVDNTQEGA 133

Query: 205 --ASTSSSEVEIQESWKFALEKSFERMDEIALSTCACG---------------------- 98
                   E+E +E W  AL++ F+RMDE+ L++C C                       
Sbjct: 134 HGGEPGGKEIENKEGWTRALKRCFQRMDEVVLNSCLCRNDWRQCSCRGIMEVEMTGTTAV 193

Query: 97  -----------ANCGDSRAVLSRGGRAIPVSFDHKPDRPDELA 2
                      ANCGDSR VL R G AIP+SFDHKPDR DELA
Sbjct: 194 VAIITTDHIVVANCGDSRGVLCREGTAIPLSFDHKPDRSDELA 236


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