BLASTX nr result

ID: Coptis23_contig00038886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038886
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534016.1| Pectate lyase precursor, putative [Ricinus c...   169   2e-40
dbj|BAM05612.1| pectate lyase, partial [Eucalyptus pyrocarpa]         169   3e-40
dbj|BAM05611.1| pectate lyase, partial [Eucalyptus pilularis]         167   8e-40
gb|ABD47739.1| pectate lyase [Eucalyptus globulus subsp. globulus]    166   2e-39
ref|XP_002316399.1| predicted protein [Populus trichocarpa] gi|2...   165   4e-39

>ref|XP_002534016.1| Pectate lyase precursor, putative [Ricinus communis]
           gi|223525981|gb|EEF28369.1| Pectate lyase precursor,
           putative [Ricinus communis]
          Length = 503

 Score =  169 bits (429), Expect = 2e-40
 Identities = 78/97 (80%), Positives = 88/97 (90%)
 Frame = +1

Query: 1   MYAIGGSANPTINSQGNRYTAPVDPNAKEVTKRVLTDEKEWTGWNWRTDGDMMVNGAFFV 180
           MYAIGGSANPTINSQGNRY AP DPNAKEVTKRV TDEK+W  WNWRTDGD+++NGAFFV
Sbjct: 319 MYAIGGSANPTINSQGNRYVAPADPNAKEVTKRVETDEKDWADWNWRTDGDVLINGAFFV 378

Query: 181 PSGFGVALQYAKASSLEPKSAALIDQLTMNAGVLGES 291
           PSG G++ QYAKASS+EPKSAALI QLT+NAGV G++
Sbjct: 379 PSGAGLSAQYAKASSVEPKSAALITQLTLNAGVFGDA 415


>dbj|BAM05612.1| pectate lyase, partial [Eucalyptus pyrocarpa]
          Length = 334

 Score =  169 bits (427), Expect = 3e-40
 Identities = 79/96 (82%), Positives = 88/96 (91%)
 Frame = +1

Query: 1   MYAIGGSANPTINSQGNRYTAPVDPNAKEVTKRVLTDEKEWTGWNWRTDGDMMVNGAFFV 180
           MYAIGGSANPTINSQGNRYTAPVD +AK+VTKRV T+E EWT WNWRT+GDMMVNGA+FV
Sbjct: 155 MYAIGGSANPTINSQGNRYTAPVDADAKQVTKRVDTEENEWTDWNWRTEGDMMVNGAYFV 214

Query: 181 PSGFGVALQYAKASSLEPKSAALIDQLTMNAGVLGE 288
           PSG G++ QY+KASSLEPKSA LIDQLTMNAGV G+
Sbjct: 215 PSGVGLSAQYSKASSLEPKSAGLIDQLTMNAGVFGD 250


>dbj|BAM05611.1| pectate lyase, partial [Eucalyptus pilularis]
          Length = 333

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/96 (81%), Positives = 88/96 (91%)
 Frame = +1

Query: 1   MYAIGGSANPTINSQGNRYTAPVDPNAKEVTKRVLTDEKEWTGWNWRTDGDMMVNGAFFV 180
           MYAIGGSANPTINSQGNRYTAPVD +AK+VTKRV T+E +WT WNWRT+GD+MVNGAFFV
Sbjct: 153 MYAIGGSANPTINSQGNRYTAPVDADAKQVTKRVDTEENDWTDWNWRTEGDIMVNGAFFV 212

Query: 181 PSGFGVALQYAKASSLEPKSAALIDQLTMNAGVLGE 288
           PSG G++ QY+KASSLEPKSA LIDQLTMNAGV G+
Sbjct: 213 PSGVGLSAQYSKASSLEPKSAGLIDQLTMNAGVFGD 248


>gb|ABD47739.1| pectate lyase [Eucalyptus globulus subsp. globulus]
          Length = 338

 Score =  166 bits (419), Expect = 2e-39
 Identities = 77/96 (80%), Positives = 88/96 (91%)
 Frame = +1

Query: 1   MYAIGGSANPTINSQGNRYTAPVDPNAKEVTKRVLTDEKEWTGWNWRTDGDMMVNGAFFV 180
           MYAIGGSANPTINSQGNRYTAPVD +AK+VTKRV T+E EWT WNWRT+GD+MVNGA+FV
Sbjct: 159 MYAIGGSANPTINSQGNRYTAPVDADAKQVTKRVDTEETEWTDWNWRTEGDIMVNGAYFV 218

Query: 181 PSGFGVALQYAKASSLEPKSAALIDQLTMNAGVLGE 288
           PSG G++ QY+KASSLEPKSA LIDQLT+NAGV G+
Sbjct: 219 PSGVGLSAQYSKASSLEPKSAGLIDQLTLNAGVFGD 254


>ref|XP_002316399.1| predicted protein [Populus trichocarpa] gi|222865439|gb|EEF02570.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  165 bits (417), Expect = 4e-39
 Identities = 77/96 (80%), Positives = 86/96 (89%)
 Frame = +1

Query: 1   MYAIGGSANPTINSQGNRYTAPVDPNAKEVTKRVLTDEKEWTGWNWRTDGDMMVNGAFFV 180
           MYAIGGSANPTINSQGNRYTAP D NAKEVTKRV T+E +W GWNWRTDGD+MVNGAFFV
Sbjct: 318 MYAIGGSANPTINSQGNRYTAPTDDNAKEVTKRVDTNEGDWAGWNWRTDGDIMVNGAFFV 377

Query: 181 PSGFGVALQYAKASSLEPKSAALIDQLTMNAGVLGE 288
           PSG G++ QY+KASS+EPKSA LI QLT+NAGV G+
Sbjct: 378 PSGAGLSAQYSKASSVEPKSAGLIQQLTLNAGVFGD 413


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