BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038881
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   100   2e-19
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    99   4e-19
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    90   2e-16
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    83   3e-14

>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  100 bits (248), Expect = 2e-19
 Identities = 58/129 (44%), Positives = 77/129 (59%), Gaps = 9/129 (6%)
 Frame = -3

Query: 392 DLLQVKRIL-----LEDDEN---YETIEFEVLKLDEVELKWDEVKSLCGQMLFLGENSSI 237
           +LL V R L     +E D+    Y T  F+V +LD    +W+ V SL  + LFLGEN S+
Sbjct: 262 ELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSL 321

Query: 236 SLLASGFPGCKPNCIYFTDDYHAGYCYRQTKEPHDMGVYNLEDGTIEPHCPLASKRI-FP 60
           SL +  FPGCK NCIY+TDDY     Y       D+G++NLEDG+IEP  P +  RI +P
Sbjct: 322 SLSSVDFPGCKGNCIYYTDDYSEDN-YDGIGGEQDLGIFNLEDGSIEP-LPCSHFRIRWP 379

Query: 59  APIWIQPTP 33
            P+W+ P P
Sbjct: 380 PPLWVTPNP 388


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 58/129 (44%), Positives = 77/129 (59%), Gaps = 9/129 (6%)
 Frame = -3

Query: 392 DLLQVKRIL-----LEDDEN---YETIEFEVLKLDEVELKWDEVKSLCGQMLFLGENSSI 237
           +LL V R L     +E D+    Y T  F+V +LD    +W+ V SL  + LFLGEN S+
Sbjct: 262 ELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSL 321

Query: 236 SLLASGFPGCKPNCIYFTDDYHAGYCYRQTKEPHDMGVYNLEDGTIEPHCPLASKRI-FP 60
           SL +  FPGCK NCIY+TDDY     Y       D+G++NLEDG+IEP  P +  RI +P
Sbjct: 322 SLSSVDFPGCKGNCIYYTDDYSEDN-YDGIGGEQDLGIFNLEDGSIEP-LPCSHFRIRWP 379

Query: 59  APIWIQPTP 33
            P+W+ P P
Sbjct: 380 PPLWVTPNP 388


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
 Frame = -3

Query: 347 YETIEFEVLKLDEVELKWDEVKSLCGQMLFLGENSSISLLASGFPGCKPNCIYFTDDYHA 168
           Y+T  FEV KLD    +W+ V SL   MLF+GENSS++L ASG  GC  +CIY+TDDY A
Sbjct: 285 YKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSA 344

Query: 167 GYCYRQTKEPHDMGVYNLEDGTIEP-HC---PLASKRIFPAPIWIQPTP 33
              Y      HD+G++ L DG+IEP  C      S+  +P P+WI P P
Sbjct: 345 NN-YDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISPNP 392


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 53/134 (39%), Positives = 74/134 (55%), Gaps = 13/134 (9%)
 Frame = -3

Query: 395 GDLLQVKRILLED---------DENYETIEFEVLKLDEVELKWDEVKSLCGQMLFLGENS 243
           GD+L + R+L +D         D  Y T+ FEV K++   L W  V++L  ++LF+G NS
Sbjct: 260 GDMLLLIRVLDQDFSDHAGEESDLVYRTVGFEVFKMNWGLLTWQRVETLGERVLFVGGNS 319

Query: 242 SISLLASGFPGCKPNCIYFTDDYHAGYCYRQTKEPHDMGVYNLEDGTIEP----HCPLAS 75
           S+S  AS F GC  +CIYFTDDY            HD+GV+ L D +IEP    +    S
Sbjct: 320 SLSFCASDFVGCSADCIYFTDDYSESN-DDDACGKHDLGVFRLRDKSIEPLPCFNQNSCS 378

Query: 74  KRIFPAPIWIQPTP 33
           +  +P PIW+ P P
Sbjct: 379 RLRWPLPIWVSPNP 392


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 4/109 (3%)
 Frame = -3

Query: 347 YETIEFEVLKLDEVELKWDEVKSLCGQMLFLGENSSISLLASGFPGCKPNCIYFTDDYHA 168
           Y TI FEV +LD    +W  + +L  + LF+GENSS+SL A+ F GC  NCIY+TDDY  
Sbjct: 290 YRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDY-L 348

Query: 167 GYCYRQTKEPHDMGVYNLEDGTIEP-HC---PLASKRIFPAPIWIQPTP 33
              Y      HD+G++ L D TIEP  C      S   +  P+W+ P P
Sbjct: 349 DANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPNP 397