BLASTX nr result

ID: Coptis23_contig00038880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038880
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171091.1| PREDICTED: protein transport protein Sec61 s...    64   1e-08
ref|XP_004146019.1| PREDICTED: protein transport protein Sec61 s...    64   1e-08
ref|XP_002946971.1| hypothetical protein VOLCADRAFT_72975 [Volvo...    64   2e-08
ref|XP_002504986.1| type II secretory pathway family [Micromonas...    64   2e-08
ref|XP_003060622.1| type II secretory pathway family protein [Mi...    64   2e-08

>ref|XP_004171091.1| PREDICTED: protein transport protein Sec61 subunit alpha-like
           [Cucumis sativus]
          Length = 476

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = +2

Query: 2   ADFMGAIGSGTGILLAVTIIYQYIETFEKEKS 97
           ADFMGAIGSGTGILLAVTIIYQY ETFEKEKS
Sbjct: 437 ADFMGAIGSGTGILLAVTIIYQYFETFEKEKS 468


>ref|XP_004146019.1| PREDICTED: protein transport protein Sec61 subunit alpha-like
           [Cucumis sativus]
          Length = 476

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = +2

Query: 2   ADFMGAIGSGTGILLAVTIIYQYIETFEKEKS 97
           ADFMGAIGSGTGILLAVTIIYQY ETFEKEKS
Sbjct: 437 ADFMGAIGSGTGILLAVTIIYQYFETFEKEKS 468


>ref|XP_002946971.1| hypothetical protein VOLCADRAFT_72975 [Volvox carteri f.
           nagariensis] gi|300268015|gb|EFJ52197.1| hypothetical
           protein VOLCADRAFT_72975 [Volvox carteri f. nagariensis]
          Length = 476

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = +2

Query: 2   ADFMGAIGSGTGILLAVTIIYQYIETFEKEKSQ 100
           ADFMGAIGSGTGILLAVTIIYQY ET+EKEK+Q
Sbjct: 438 ADFMGAIGSGTGILLAVTIIYQYFETYEKEKAQ 470


>ref|XP_002504986.1| type II secretory pathway family [Micromonas sp. RCC299]
           gi|226520255|gb|ACO66244.1| type II secretory pathway
           family [Micromonas sp. RCC299]
          Length = 475

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = +2

Query: 2   ADFMGAIGSGTGILLAVTIIYQYIETFEKEKSQ 100
           ADFMGAIGSGTGILLAVTIIYQY ETFEKE++Q
Sbjct: 436 ADFMGAIGSGTGILLAVTIIYQYFETFEKERAQ 468


>ref|XP_003060622.1| type II secretory pathway family protein [Micromonas pusilla
           CCMP1545] gi|226458093|gb|EEH55391.1| type II secretory
           pathway family protein [Micromonas pusilla CCMP1545]
          Length = 476

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = +2

Query: 2   ADFMGAIGSGTGILLAVTIIYQYIETFEKEKSQ 100
           ADFMGAIGSGTGILLAVTIIYQY ETFEKE++Q
Sbjct: 437 ADFMGAIGSGTGILLAVTIIYQYFETFEKERAQ 469


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