BLASTX nr result

ID: Coptis23_contig00038833 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038833
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156884.1| PREDICTED: LOW QUALITY PROTEIN: GTP pyrophos...    59   3e-07
ref|XP_004152359.1| PREDICTED: GTP pyrophosphokinase-like [Cucum...    59   3e-07
emb|CBI36887.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002272154.1| PREDICTED: GTP pyrophosphokinase-like [Vitis...    57   2e-06
ref|XP_003520744.1| PREDICTED: GTP pyrophosphokinase-like [Glyci...    55   8e-06

>ref|XP_004156884.1| PREDICTED: LOW QUALITY PROTEIN: GTP pyrophosphokinase-like [Cucumis
           sativus]
          Length = 883

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/51 (64%), Positives = 39/51 (76%), Gaps = 4/51 (7%)
 Frame = +1

Query: 169 SMSVFSVECVNLCKLSGGSGNIINKYECS----AWKAPRVLTGFLATTTTS 309
           SMSV S+ECVN+CK S G G+   +Y+CS    AWKAPRVLTGFLA+TT S
Sbjct: 6   SMSV-SLECVNICKFSKGDGSS-GRYDCSILSCAWKAPRVLTGFLASTTHS 54


>ref|XP_004152359.1| PREDICTED: GTP pyrophosphokinase-like [Cucumis sativus]
          Length = 883

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/51 (64%), Positives = 39/51 (76%), Gaps = 4/51 (7%)
 Frame = +1

Query: 169 SMSVFSVECVNLCKLSGGSGNIINKYECS----AWKAPRVLTGFLATTTTS 309
           SMSV S+ECVN+CK S G G+   +Y+CS    AWKAPRVLTGFLA+TT S
Sbjct: 6   SMSV-SLECVNICKFSKGDGSS-GRYDCSILSCAWKAPRVLTGFLASTTHS 54


>emb|CBI36887.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 4/51 (7%)
 Frame = +1

Query: 169 SMSVFSVECVNLCKLSGGSGNIINKYECS----AWKAPRVLTGFLATTTTS 309
           SMSV SVECVN+CK S G G++  +++CS    AWKAPRVL+GFLA+T  S
Sbjct: 6   SMSV-SVECVNICKFSKGDGSV--RHDCSVLSCAWKAPRVLSGFLASTAHS 53


>ref|XP_002272154.1| PREDICTED: GTP pyrophosphokinase-like [Vitis vinifera]
          Length = 887

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 4/51 (7%)
 Frame = +1

Query: 169 SMSVFSVECVNLCKLSGGSGNIINKYECS----AWKAPRVLTGFLATTTTS 309
           SMSV SVECVN+CK S G G++  +++CS    AWKAPRVL+GFLA+T  S
Sbjct: 6   SMSV-SVECVNICKFSKGDGSV--RHDCSVLSCAWKAPRVLSGFLASTAHS 53


>ref|XP_003520744.1| PREDICTED: GTP pyrophosphokinase-like [Glycine max]
          Length = 882

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/52 (61%), Positives = 36/52 (69%), Gaps = 6/52 (11%)
 Frame = +1

Query: 163 MASMSVFSV--ECVNLCKLSGGSGNIINKYECS----AWKAPRVLTGFLATT 300
           MAS S  SV  ECVN CKL  G GN   +++CS    AWKAPRVLTGFLA+T
Sbjct: 1   MASASSLSVSLECVNACKLWRGDGN--GRFDCSLLSSAWKAPRVLTGFLAST 50


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