BLASTX nr result

ID: Coptis23_contig00038826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038826
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281887.2| PREDICTED: cucumisin [Vitis vinifera]             162   3e-38
emb|CBI31596.3| unnamed protein product [Vitis vinifera]              162   3e-38
ref|XP_002316252.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36
ref|XP_002316254.1| predicted protein [Populus trichocarpa] gi|2...   154   9e-36
ref|XP_002277495.2| PREDICTED: uncharacterized protein LOC100259...   147   9e-34

>ref|XP_002281887.2| PREDICTED: cucumisin [Vitis vinifera]
          Length = 732

 Score =  162 bits (410), Expect = 3e-38
 Identities = 83/141 (58%), Positives = 95/141 (67%)
 Frame = +2

Query: 5   NGKVYEGISINTFPGDDTYPMIYAGDAPNKAKGWTGDESRYCDPDSLDKNLVTGKIVLCD 184
           N KVYEG+S+NTF  DD YP+IY GDAPN   G+    SRYC  DSLDK+LV GKIVLCD
Sbjct: 338 NNKVYEGVSVNTFEMDDMYPIIYGGDAPNTTGGYDSSYSRYCYEDSLDKSLVDGKIVLCD 397

Query: 185 SLNSXXXXXXXXXXXTVMQDVRLRDVAFIFQLPATYLSLEDGGNVSQYINTTSNATADIF 364
            L S           TVMQD    D A+I+ LPA+YL   DGG V  Y+N+TS   A I 
Sbjct: 398 WLTSGKAAIAAGAVGTVMQDGGYSDSAYIYALPASYLDPRDGGKVHHYLNSTSKPMAIIQ 457

Query: 365 KSIEIKDESAPFVVSFSSRGP 427
           KS+E+KDE APFVVSFSSRGP
Sbjct: 458 KSVEVKDELAPFVVSFSSRGP 478


>emb|CBI31596.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  162 bits (410), Expect = 3e-38
 Identities = 83/141 (58%), Positives = 95/141 (67%)
 Frame = +2

Query: 5   NGKVYEGISINTFPGDDTYPMIYAGDAPNKAKGWTGDESRYCDPDSLDKNLVTGKIVLCD 184
           N KVYEG+S+NTF  DD YP+IY GDAPN   G+    SRYC  DSLDK+LV GKIVLCD
Sbjct: 303 NNKVYEGVSVNTFEMDDMYPIIYGGDAPNTTGGYDSSYSRYCYEDSLDKSLVDGKIVLCD 362

Query: 185 SLNSXXXXXXXXXXXTVMQDVRLRDVAFIFQLPATYLSLEDGGNVSQYINTTSNATADIF 364
            L S           TVMQD    D A+I+ LPA+YL   DGG V  Y+N+TS   A I 
Sbjct: 363 WLTSGKAAIAAGAVGTVMQDGGYSDSAYIYALPASYLDPRDGGKVHHYLNSTSKPMAIIQ 422

Query: 365 KSIEIKDESAPFVVSFSSRGP 427
           KS+E+KDE APFVVSFSSRGP
Sbjct: 423 KSVEVKDELAPFVVSFSSRGP 443


>ref|XP_002316252.1| predicted protein [Populus trichocarpa] gi|222865292|gb|EEF02423.1|
           predicted protein [Populus trichocarpa]
          Length = 701

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/142 (55%), Positives = 96/142 (67%), Gaps = 1/142 (0%)
 Frame = +2

Query: 5   NGKVYEGISINTF-PGDDTYPMIYAGDAPNKAKGWTGDESRYCDPDSLDKNLVTGKIVLC 181
           NG +YEGISINTF PG+   P IY GDAPNK  G+ G ESRYC  DSL+  +V GK+VLC
Sbjct: 309 NGAIYEGISINTFEPGNIMPPFIYGGDAPNKTAGYNGSESRYCPLDSLNSTVVEGKVVLC 368

Query: 182 DSLNSXXXXXXXXXXXTVMQDVRLRDVAFIFQLPATYLSLEDGGNVSQYINTTSNATADI 361
           D ++            ++M      DVAF F LP +YLS  DG ++ +Y+N+TS  TA I
Sbjct: 369 DQISGGEEARASHAVGSIMNGDDYSDVAFSFPLPVSYLSSSDGADLLKYLNSTSEPTATI 428

Query: 362 FKSIEIKDESAPFVVSFSSRGP 427
            KSIEIKDE+APFVVSFSSRGP
Sbjct: 429 MKSIEIKDETAPFVVSFSSRGP 450


>ref|XP_002316254.1| predicted protein [Populus trichocarpa] gi|222865294|gb|EEF02425.1|
           predicted protein [Populus trichocarpa]
          Length = 697

 Score =  154 bits (388), Expect = 9e-36
 Identities = 78/142 (54%), Positives = 95/142 (66%), Gaps = 1/142 (0%)
 Frame = +2

Query: 5   NGKVYEGISINTF-PGDDTYPMIYAGDAPNKAKGWTGDESRYCDPDSLDKNLVTGKIVLC 181
           NG +YEGISINTF PG+   P IY GDAPNK  G+ G ESRYC  DSL+  +V GK+VLC
Sbjct: 302 NGAIYEGISINTFEPGNIVPPFIYGGDAPNKTAGYDGSESRYCPLDSLNSTVVEGKVVLC 361

Query: 182 DSLNSXXXXXXXXXXXTVMQDVRLRDVAFIFQLPATYLSLEDGGNVSQYINTTSNATADI 361
           D ++            ++M      DVAF F LP +YLS  DG ++ +Y+N+TS  TA I
Sbjct: 362 DQISGGEEARASHAVGSIMNGDDYSDVAFSFPLPVSYLSSSDGADLLKYLNSTSEPTATI 421

Query: 362 FKSIEIKDESAPFVVSFSSRGP 427
            KSIE KDE+APFVVSFSSRGP
Sbjct: 422 MKSIETKDETAPFVVSFSSRGP 443


>ref|XP_002277495.2| PREDICTED: uncharacterized protein LOC100259879 [Vitis vinifera]
          Length = 1429

 Score =  147 bits (371), Expect = 9e-34
 Identities = 72/141 (51%), Positives = 95/141 (67%)
 Frame = +2

Query: 5   NGKVYEGISINTFPGDDTYPMIYAGDAPNKAKGWTGDESRYCDPDSLDKNLVTGKIVLCD 184
           +  V+EG+SINTF  +D YP+IY GDAPN A G++G+ SR+C P +L+ NLV GKIVLCD
Sbjct: 353 DSNVFEGVSINTFELNDMYPLIYGGDAPNTAAGFSGNRSRFCFPSTLNPNLVKGKIVLCD 412

Query: 185 SLNSXXXXXXXXXXXTVMQDVRLRDVAFIFQLPATYLSLEDGGNVSQYINTTSNATADIF 364
              +            +M D   +D +  F LPA++LS  DG +++ YIN+TSN TA IF
Sbjct: 413 VKTNGAGAFLAGAVGALMADTLPKDSSRSFPLPASHLSARDGSSIANYINSTSNPTASIF 472

Query: 365 KSIEIKDESAPFVVSFSSRGP 427
           KS E+ D  AP+VVSFSSRGP
Sbjct: 473 KSTEVSDALAPYVVSFSSRGP 493



 Score =  126 bits (316), Expect = 2e-27
 Identities = 67/145 (46%), Positives = 90/145 (62%), Gaps = 6/145 (4%)
 Frame = +2

Query: 11   KVYEGISINTFPGDDTYPMIYAGDAPNKAKGWTGDESRYCDPDSLDKNLVTGKIVLCDSL 190
            KVY+G SIN F  +  YP+IY GDAPN   G+ G+ SR+C+ +SL+ NLV GKIVLC  L
Sbjct: 1030 KVYKGFSINAFEPNGMYPLIYGGDAPNTRGGFRGNTSRFCEKNSLNPNLVKGKIVLCIGL 1089

Query: 191  NSXXXXXXXXXXXTVMQDVRL------RDVAFIFQLPATYLSLEDGGNVSQYINTTSNAT 352
             +             +  V +      +D ++I+ LPA+ L   DG  ++ YI++TSN T
Sbjct: 1090 GAGLEETSNAFLAGAVGTVIVDGLRFPKDSSYIYPLPASRLGAGDGKRIAYYISSTSNPT 1149

Query: 353  ADIFKSIEIKDESAPFVVSFSSRGP 427
            A I KSIE+KD  AP+V SFSSRGP
Sbjct: 1150 ASILKSIEVKDTLAPYVPSFSSRGP 1174


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