BLASTX nr result

ID: Coptis23_contig00038801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038801
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38971.3| unnamed protein product [Vitis vinifera]               85   5e-15
ref|XP_003632821.1| PREDICTED: receptor-like protein 12-like [Vi...    81   1e-13
ref|XP_002268914.2| PREDICTED: LRR receptor-like serine/threonin...    80   2e-13
emb|CBI36388.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_003632825.1| PREDICTED: leucine-rich repeat receptor prot...    79   3e-13

>emb|CBI38971.3| unnamed protein product [Vitis vinifera]
          Length = 1193

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
 Frame = +2

Query: 2    GETSYEGNPFLCGPPLLKQCHXXXXXXXXXXXXXEN-----FGMDPISFLSSFAAAYVVF 166
            GE+SYE NPFLCGP L ++C+             +      + +D + F +SF A+Y++ 
Sbjct: 780  GESSYEDNPFLCGPMLKRKCNTSIESPNSPSQPSQESEAKWYDIDHVVFFASFVASYIMI 839

Query: 167  LLGFVIVLYVNPNWRGLWFNFIDACLSFMF 256
            LLGF  +LY+NP WR  WFNFI+ C+ F +
Sbjct: 840  LLGFAAILYINPYWRQRWFNFIEECIYFRY 869


>ref|XP_003632821.1| PREDICTED: receptor-like protein 12-like [Vitis vinifera]
          Length = 1097

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
 Frame = +2

Query: 5    ETSYEGNPFLCGPPLLKQCHXXXXXXXXXXXXXEN----FGMDPISFLSSFAAAYVVFLL 172
            E SYEGNPFLCG  L ++C+             E+    + ++ + F +SF  +Y++ LL
Sbjct: 994  ERSYEGNPFLCGELLKRKCNTSIESPCAPSQSFESEAKWYDINHVVFFASFTTSYIMILL 1053

Query: 173  GFVIVLYVNPNWRGLWFNFIDACL 244
            GFVI+LY+NP WR  WFNFI+ C+
Sbjct: 1054 GFVIILYINPYWRHRWFNFIEECI 1077


>ref|XP_002268914.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
            FLS2-like [Vitis vinifera]
          Length = 1027

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
 Frame = +2

Query: 5    ETSYEGNPFLCGPPLLKQCHXXXXXXXXXXXXXEN----FGMDPISFLSSFAAAYVVFLL 172
            E++YEGNPFLCG  L ++C+             E+    + ++ + F +SF  +Y++ LL
Sbjct: 924  ESNYEGNPFLCGELLKRKCNTSIESPCAPSQSFESEAKWYDINHVVFFASFTTSYIIILL 983

Query: 173  GFVIVLYVNPNWRGLWFNFIDACLSFMFPCCSEAIYEIS 289
            GF  +LY+NP WR  WFNFI+ C+   +   S+++ ++S
Sbjct: 984  GFATILYINPYWRHRWFNFIEECIYSCYYFVSDSLSKLS 1022


>emb|CBI36388.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
 Frame = +2

Query: 5   ETSYEGNPFLCGPPLLKQCHXXXXXXXXXXXXXEN----FGMDPISFLSSFAAAYVVFLL 172
           E+SYEGNPFLCG  L ++C+             E+    + ++ + F +SF  +Y++ LL
Sbjct: 415 ESSYEGNPFLCGELLKRKCNTCIESSCAPSQSFESEAKWYDINHVVFFASFTTSYIMILL 474

Query: 173 GFVIVLYVNPNWRGLWFNFIDACL 244
           GFV +LY+NP WR  WFNFI+ C+
Sbjct: 475 GFVTILYINPYWRHRWFNFIEECI 498


>ref|XP_003632825.1| PREDICTED: leucine-rich repeat receptor protein kinase EXS-like
            [Vitis vinifera]
          Length = 1026

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
 Frame = +2

Query: 5    ETSYEGNPFLCGPPLLKQCHXXXXXXXXXXXXXEN----FGMDPISFLSSFAAAYVVFLL 172
            E+SYEGNPFLCG  L ++C+             E+    + ++ + F +SF  +Y++ LL
Sbjct: 923  ESSYEGNPFLCGELLKRKCNTSIESPCAPSQSFESETKWYDINHVVFFASFTTSYIMILL 982

Query: 173  GFVIVLYVNPNWRGLWFNFIDACL 244
            GFV +LY+NP WR  WFNFI+ C+
Sbjct: 983  GFVTILYINPYWRHRWFNFIEECV 1006


Top