BLASTX nr result

ID: Coptis23_contig00038793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038793
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633219.1| PREDICTED: protein At-4/1-like [Vitis vinifera]   117   7e-25
emb|CBI17909.3| unnamed protein product [Vitis vinifera]              117   7e-25
gb|AAO32317.1| 4/1 protein [Arabidopsis thaliana]                     106   2e-21
ref|NP_194332.2| uncharacterized protein [Arabidopsis thaliana] ...   106   2e-21
ref|NP_001190843.1| uncharacterized protein [Arabidopsis thalian...   106   2e-21

>ref|XP_003633219.1| PREDICTED: protein At-4/1-like [Vitis vinifera]
          Length = 244

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/94 (57%), Positives = 79/94 (84%)
 Frame = +1

Query: 19  EEQMGNLLSTFDQIYDDFKNGITEMNSLKSSYGIEIKRRESLERSFNELKQDNDRLVKLY 198
           +E+M +LLSTFDQIY DF+NG+ E+  L+S+  +EI++R++L+ + + LKQDN+RL KLY
Sbjct: 6   DEEMESLLSTFDQIYKDFQNGVVEVQLLRSNCNVEIEKRQALQSTCDSLKQDNERLRKLY 65

Query: 199 SDSLNKLANQIERRSNCQSLKDELKKVNEEQISK 300
           ++SL KLA Q+ERR+ CQSLK+ELK+VN+E +SK
Sbjct: 66  TESLYKLAEQLERRTKCQSLKEELKRVNDEHLSK 99


>emb|CBI17909.3| unnamed protein product [Vitis vinifera]
          Length = 250

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/94 (57%), Positives = 79/94 (84%)
 Frame = +1

Query: 19  EEQMGNLLSTFDQIYDDFKNGITEMNSLKSSYGIEIKRRESLERSFNELKQDNDRLVKLY 198
           +E+M +LLSTFDQIY DF+NG+ E+  L+S+  +EI++R++L+ + + LKQDN+RL KLY
Sbjct: 6   DEEMESLLSTFDQIYKDFQNGVVEVQLLRSNCNVEIEKRQALQSTCDSLKQDNERLRKLY 65

Query: 199 SDSLNKLANQIERRSNCQSLKDELKKVNEEQISK 300
           ++SL KLA Q+ERR+ CQSLK+ELK+VN+E +SK
Sbjct: 66  TESLYKLAEQLERRTKCQSLKEELKRVNDEHLSK 99


>gb|AAO32317.1| 4/1 protein [Arabidopsis thaliana]
          Length = 242

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/94 (55%), Positives = 70/94 (74%)
 Frame = +1

Query: 19  EEQMGNLLSTFDQIYDDFKNGITEMNSLKSSYGIEIKRRESLERSFNELKQDNDRLVKLY 198
           +EQM  LLS+FDQIY+DFK G+ E+N  +S   +E  RRE LE S   LK++N+RL KLY
Sbjct: 1   DEQMNLLLSSFDQIYEDFKIGLNEINVYRSKSNVESSRREVLEISNKNLKEENERLKKLY 60

Query: 199 SDSLNKLANQIERRSNCQSLKDELKKVNEEQISK 300
           ++SLN  A+Q+E R+ C SLK+ELK+VN+E  SK
Sbjct: 61  TESLNNFADQLEHRTKCHSLKEELKRVNDENKSK 94


>ref|NP_194332.2| uncharacterized protein [Arabidopsis thaliana]
           gi|122180106|sp|Q1PE49.1|4ON1_ARATH RecName:
           Full=Protein At-4/1; AltName: Full=Tomato spotted wilt
           virus movement protein-interacting protein 4/1;
           Short=At-4/1 gi|91806726|gb|ABE66090.1| unknown
           [Arabidopsis thaliana] gi|332659745|gb|AEE85145.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 247

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/94 (55%), Positives = 70/94 (74%)
 Frame = +1

Query: 19  EEQMGNLLSTFDQIYDDFKNGITEMNSLKSSYGIEIKRRESLERSFNELKQDNDRLVKLY 198
           +EQM  LLS+FDQIY+DFK G+ E+N  +S   +E  RRE LE S   LK++N+RL KLY
Sbjct: 6   DEQMNLLLSSFDQIYEDFKIGLNEINVYRSKSNVESSRREVLEISNKNLKEENERLKKLY 65

Query: 199 SDSLNKLANQIERRSNCQSLKDELKKVNEEQISK 300
           ++SLN  A+Q+E R+ C SLK+ELK+VN+E  SK
Sbjct: 66  TESLNNFADQLEHRTKCHSLKEELKRVNDENKSK 99


>ref|NP_001190843.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332659746|gb|AEE85146.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 268

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/94 (55%), Positives = 70/94 (74%)
 Frame = +1

Query: 19  EEQMGNLLSTFDQIYDDFKNGITEMNSLKSSYGIEIKRRESLERSFNELKQDNDRLVKLY 198
           +EQM  LLS+FDQIY+DFK G+ E+N  +S   +E  RRE LE S   LK++N+RL KLY
Sbjct: 6   DEQMNLLLSSFDQIYEDFKIGLNEINVYRSKSNVESSRREVLEISNKNLKEENERLKKLY 65

Query: 199 SDSLNKLANQIERRSNCQSLKDELKKVNEEQISK 300
           ++SLN  A+Q+E R+ C SLK+ELK+VN+E  SK
Sbjct: 66  TESLNNFADQLEHRTKCHSLKEELKRVNDENKSK 99


Top