BLASTX nr result

ID: Coptis23_contig00038789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038789
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32712.3| unnamed protein product [Vitis vinifera]               86   2e-15
ref|XP_002275457.1| PREDICTED: uncharacterized protein LOC100248...    86   2e-15
ref|XP_002323463.1| NAC domain protein, IPR003441 [Populus trich...    84   2e-14
ref|XP_002326347.1| NAC domain protein, IPR003441 [Populus trich...    77   1e-12
ref|XP_002519550.1| transcription factor, putative [Ricinus comm...    71   8e-11

>emb|CBI32712.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/99 (40%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
 Frame = +3

Query: 15  PRQIPSWYMRHQ----DALMKRLCFFLYMQLDDWVLCRVRQKDNLPRNMWVDQNCPSSQP 182
           P+ + + ++ H+    D++ + L     M+LDDWVLCRVRQK ++PRN+W D+N PSS+P
Sbjct: 126 PKGVKTDWIMHEYRLLDSMFRTLKHKGSMRLDDWVLCRVRQKSSIPRNIWEDRNGPSSEP 185

Query: 183 FGYSPRVDEPPSKIADPTFDIIANYRNNGCPMLAYILST 299
             YSP VD+  +   +   ++I +Y  N CP+L YI ++
Sbjct: 186 ASYSPAVDKACNMTTNSNVEMIKSYLYNDCPLLPYIFAS 224


>ref|XP_002275457.1| PREDICTED: uncharacterized protein LOC100248298 [Vitis vinifera]
          Length = 342

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 40/99 (40%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
 Frame = +3

Query: 15  PRQIPSWYMRHQ----DALMKRLCFFLYMQLDDWVLCRVRQKDNLPRNMWVDQNCPSSQP 182
           P+ + + ++ H+    D++ + L     M+LDDWVLCRVRQK ++PRN+W D+N PSS+P
Sbjct: 126 PKGVKTDWIMHEYRLLDSMFRTLKHKGSMRLDDWVLCRVRQKSSIPRNIWEDRNGPSSEP 185

Query: 183 FGYSPRVDEPPSKIADPTFDIIANYRNNGCPMLAYILST 299
             YSP VD+  +   +   ++I +Y  N CP+L YI ++
Sbjct: 186 ASYSPAVDKACNMTTNSNVEMIKSYLYNDCPLLPYIFAS 224


>ref|XP_002323463.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222868093|gb|EEF05224.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 313

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = +3

Query: 87  MQLDDWVLCRVRQKDNLPRNMWVDQNCPSSQPFGYSPRVDEPPSKIADPTFDIIANYRNN 266
           M+LDDWVLC+VRQK+++PR+ W DQN PSS P G+ P V++      +P  ++I NY  N
Sbjct: 136 MRLDDWVLCQVRQKNSIPRSTWEDQNVPSSAPTGFFPGVNDLLDTNINPNIEMIRNYFYN 195

Query: 267 GCPMLAYILST 299
            CPML YI S+
Sbjct: 196 DCPMLPYIFSS 206


>ref|XP_002326347.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222833540|gb|EEE72017.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 337

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
 Frame = +3

Query: 87  MQLDDWVLCRVRQKDNLPRNMWVDQNCPS--SQPFGYSPRVDEPPSKIADPTFDIIANYR 260
           M+LDDWVLCRVRQK+++PRN W DQN PS  S P G  P+V+E      +P  +++ NY 
Sbjct: 153 MRLDDWVLCRVRQKNSIPRNTWQDQNIPSCASAPTGLFPKVNELQQMNINPNTEMVTNYF 212

Query: 261 NNGCPMLAYILS 296
            + CPML  I S
Sbjct: 213 YDDCPMLPCIFS 224


>ref|XP_002519550.1| transcription factor, putative [Ricinus communis]
           gi|223541413|gb|EEF42964.1| transcription factor,
           putative [Ricinus communis]
          Length = 308

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
 Frame = +3

Query: 15  PRQIPSWYMRHQDALMKRLCFF----LYMQLDDWVLCRVRQKDNLPRNMWVDQNCPSSQP 182
           P+ I + ++ H+  L+  L         M+LDDWVLCRVRQK++ PR+ W D N PS   
Sbjct: 124 PKGIKTDWIMHEYRLLDSLSLNPKNKASMRLDDWVLCRVRQKNSFPRSTWEDPNDPSY-- 181

Query: 183 FGYSPRVDEPPSKIADPTFDIIANYRNNGCPMLAYILST 299
             Y P       K+ DP  +++ NY  N CPML YI ++
Sbjct: 182 --YEPLAAGYFPKVNDPNTEMVKNYLYNDCPMLPYIFAS 218


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