BLASTX nr result

ID: Coptis23_contig00038784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00038784
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_054945.1| acetyl-CoA carboxylase beta subunit [Spinacia o...   102   4e-20
gb|ADD31602.1| acetyl-CoA carboxylase carboxyltransferase beta s...    94   9e-18
ref|YP_001294193.1| acetyl-CoA carboxylase carboxyltransferase b...    93   2e-17
gb|ADD31605.1| acetyl-CoA carboxylase carboxyltransferase beta s...    92   3e-17
gb|AAL55274.1| acetyl-CoA carboxylase subunit [Rumex orthoneurus]      92   4e-17

>ref|NP_054945.1| acetyl-CoA carboxylase beta subunit [Spinacia oleracea]
           gi|7636118|emb|CAB88738.1| acetyl-coA carboxylase beta
           subunit [Spinacia oleracea]
          Length = 522

 Score =  102 bits (253), Expect = 4e-20
 Identities = 46/69 (66%), Positives = 54/69 (78%)
 Frame = +2

Query: 107 MLIPRGNFQMIIHRTAINLLYFHSNRGQEGSMEKWWFNSMLSKEELEHRCGLSKSLAGIG 286
           MLI  GN Q+  HR  I+  YFH+NRGQE SM+KWWFNSMLSK+ELEH CGLSKS+  +G
Sbjct: 1   MLIRAGNVQIYFHRMTIHQFYFHANRGQESSMKKWWFNSMLSKKELEHGCGLSKSMDSLG 60

Query: 287 PIENTNGSE 313
           PIENT+  E
Sbjct: 61  PIENTSTKE 69


>gb|ADD31602.1| acetyl-CoA carboxylase carboxyltransferase beta subunit protein
           [Cornus florida]
          Length = 509

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/53 (79%), Positives = 47/53 (88%)
 Frame = +2

Query: 155 INLLYFHSNRGQEGSMEKWWFNSMLSKEELEHRCGLSKSLAGIGPIENTNGSE 313
           I+LLYFH+NRGQE SMEKWWFNSML K+ELEHRCGLSKS   +GPIENT+ SE
Sbjct: 3   IHLLYFHANRGQENSMEKWWFNSMLFKKELEHRCGLSKSTGSLGPIENTSESE 55


>ref|YP_001294193.1| acetyl-CoA carboxylase carboxyltransferase beta subunit [Buxus
           microphylla] gi|146762294|gb|ABQ45258.1| acetyl-CoA
           carboxylase carboxyltransferase beta subunit [Buxus
           microphylla]
          Length = 506

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/53 (77%), Positives = 46/53 (86%)
 Frame = +2

Query: 155 INLLYFHSNRGQEGSMEKWWFNSMLSKEELEHRCGLSKSLAGIGPIENTNGSE 313
           I+LLY H+NRGQEGSMEKWWFNSMLS EELEH CGLSKS+  +GPI NT+G E
Sbjct: 3   IHLLYVHANRGQEGSMEKWWFNSMLSNEELEHACGLSKSMESLGPIGNTSGGE 55


>gb|ADD31605.1| acetyl-CoA carboxylase carboxyltransferase beta subunit protein
           [Gunnera manicata]
          Length = 515

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/53 (79%), Positives = 47/53 (88%)
 Frame = +2

Query: 155 INLLYFHSNRGQEGSMEKWWFNSMLSKEELEHRCGLSKSLAGIGPIENTNGSE 313
           I+LLYFH+NRG E SMEK WFNSMLS EELEHRCGLSKS+  +GPIENT+GSE
Sbjct: 3   IHLLYFHANRGPESSMEKCWFNSMLSNEELEHRCGLSKSMDSLGPIENTSGSE 55


>gb|AAL55274.1| acetyl-CoA carboxylase subunit [Rumex orthoneurus]
          Length = 336

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/60 (70%), Positives = 48/60 (80%)
 Frame = +2

Query: 134 MIIHRTAINLLYFHSNRGQEGSMEKWWFNSMLSKEELEHRCGLSKSLAGIGPIENTNGSE 313
           M  HR  I+L +FH+NRGQE SMEKWWFNSMLSKEE EHRCGLSKS   + PI+NT+ SE
Sbjct: 1   MTFHRMTIHL-FFHANRGQESSMEKWWFNSMLSKEEFEHRCGLSKSTGSLDPIDNTSSSE 59


Top